Haliangium ochraceum: Hoch_3182
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Entry
Hoch_3182 CDS
T01103
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoh03400
]
Hoch_3182
DNA repair and recombination proteins [BR:
hoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Hoch_3182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
AAA
AAA_16
DUF7125
GvpD_P-loop
DUF7129
NACHT
ABC_tran
Zn_ribbon_8
NTPase_1
TniB
nSTAND_NTPase5
nSTAND3
GvpD_bR2
AAA_24
AAA_14
AAA_29
DAP3
Motif
Other DBs
NCBI-ProteinID:
ACY15684
UniProt:
D0LSI5
LinkDB
All DBs
Position
4383972..4385369
Genome browser
AA seq
465 aa
AA seq
DB search
MSKSQKRQKTLYRCQSCAHTETRWMGKCPACGEWGTLVEEAVASGRAASASIAAPDEAMP
VRVDQVGALDEADDKHTRLACGIGEVDRVLGGGLVPGAFVLLGGDPGVGKSTLLVQTLKG
IADAVAERDGSVLYVSGEESVRQTAMRARRVDAVSPQLSLLAEINLGRILEHAKRMQPAV
LAIDSIQTIFTDELESIPGSVGQVRECAGRLMHFAKSTGIPTILVGHVTKGGQIAGPKTL
EHVVDAVIYFEGEGGSPYRILRAHKNRFGSTQEMGVFEMRASGLCEVQNPSELFLAERPM
GAPGSVVVASAEGSRPILVEVQALVAPPSAGVGRRTAAGVDGNRLALLLAVLAQRANCDV
LSEDVFVNVAGGLRVAEPAIDLGVACAVASSALGRAVDARTVMFGEVGLTGEVRAVNFAD
LRLAEAAKLGFQRCLLPKQNSLRLEADHGLELIAVSRLTEALERL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaagtcgcagaaacgccagaagacgctctaccgctgccagagctgcgcccacacc
gagacccggtggatgggcaaatgcccggcctgcggcgagtggggcacgctggtcgaagag
gccgtggcctcgggtcgcgcggccagcgcgagcatcgcggcaccggacgaggcgatgccg
gtgcgcgtcgaccaggtcggcgcgctcgacgaggcggacgataagcacacgcgtctggcc
tgcggcatcggcgaggtcgatcgcgtgctcggcggcggcttggtgcccggcgccttcgtg
ctgctcggcggcgacccgggcgtgggcaagtccacgctgctggtgcagacgctcaagggc
atcgccgacgcggtggccgagcgcgatggcagcgtgctgtacgtgagcggtgaggagtcg
gtgcggcagaccgcgatgcgggcgcggcgcgtggatgcggtgtcgccgcagctctcgctg
ctggccgagatcaacctcggccgcatcctcgagcacgccaagcgcatgcagcccgcggta
ctggccatcgattcgattcagaccatcttcaccgacgagctggagtcgatcccgggctcg
gtgggccaggtgcgcgagtgcgcgggccggctcatgcacttcgccaagtccacgggcatc
ccgaccatcctcgtcggccatgtgaccaagggcgggcagatcgcgggccccaagaccctc
gagcacgtggtcgacgcggtcatctacttcgagggcgagggcggcagcccgtatcgcatc
ctgcgggcgcacaagaaccgctttggctcgacccaggagatgggcgtcttcgagatgcgc
gccagcggtctgtgcgaggtgcagaacccgtccgagctgtttctggccgagcgtccgatg
ggtgcgcccggctcggtggtcgtggccagcgccgagggcagccggccgattctggtcgaa
gtgcaggcgctggtcgcgccgccctcggccggggtgggacggcgtacggccgcgggcgtg
gacggcaaccgcctggcgctgctactcgcggtgctggcgcagcgcgccaactgcgacgtg
ctcagcgaggacgtgttcgtcaacgtggccggcggcttgcgcgtggccgagcccgcgatc
gatctcggcgtggcctgcgcggtggcgtcgtcggcgctgggcagggccgtagacgcgcgc
accgtgatgtttggcgaggtcggcctcaccggcgaggtgcgggccgtgaacttcgccgac
ctgcgcctggccgaagccgccaagctgggtttccagcgctgccttctgcccaagcagaac
agcctgcgcctcgaggccgaccacggtctcgagctcatcgccgtgagccgcctcaccgag
gcgctcgagcgcctctga
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