Haliangium ochraceum: Hoch_3544
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Entry
Hoch_3544 CDS
T01103
Name
(GenBank) tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
hoh
Haliangium ochraceum
Pathway
hoh04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Hoch_3544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hoh03016
]
Hoch_3544
Enzymes [BR:
hoh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
Hoch_3544
Transfer RNA biogenesis [BR:
hoh03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Hoch_3544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
Asn_synthase
ThiI
NAD_synthase
QueC
Beta-barrel_CAF17_C
Motif
Other DBs
NCBI-ProteinID:
ACY16046
UniProt:
D0LWB4
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All DBs
Position
4878380..4879555
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AA seq
391 aa
AA seq
DB search
MAAQSLIVAALSGGVDSAVTAAMLVEQGHRVVGMTMRLYDASGTSASVGGRCCGPRDIED
ARRVCAHLGIPFYVVNFEVDFAHTVIDDFVDTYLAGETPNPCVKCNQHIKFTPLLARARA
LGAETVATGHYARLEDTGAGIRLRRGRDASKDQSYFLFSMPREELASVRFPLGAMTKDEV
RDKARAYGLPNAAKADSQEICFVPDGDYAGFVEAEALRRSRPVPASGDIVDGEGQVLGRH
RGVHHYTIGQRRGLGNLRTQTRSPTPLYVIGVDRARDRVVVGPREQAARRSVPVRDVRWL
STPPAEGRLSAGVQVRYRSSPLPATLELCGEGDERGKRVRVHFDDAAVIASPGQAAVFYD
GDTVLGGGWIARDEQPLSETQPPADRSQPAI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacagagcctcatcgtcgccgcgctctcgggcggcgtggacagcgcggtcacc
gctgccatgttggtcgagcagggccaccgcgtggtcggcatgaccatgcgcctctacgac
gccagcggcaccagcgcatcggtcggcggtcgctgctgcggcccgcgcgacatcgaagac
gcgcgccgggtgtgcgcccacctcggcatcccgttctacgtggtcaacttcgaggtcgac
ttcgcgcacacggtcatcgacgatttcgtcgacacctacctggcgggcgagacgcccaac
ccctgcgtaaagtgcaaccaacacatcaagtttaccccgctactcgcgcgagcgcgcgcg
ctcggcgccgagaccgtggccaccgggcactacgcgcgcctggaggacacgggcgcggga
attcgcctccgccgcggccgcgacgcgagcaaggatcagtcgtacttcctgttctcgatg
ccgcgcgaggagctggcctcggtgcgcttccccctgggcgcgatgaccaaagacgaggtc
cgcgacaaggcccgcgcctacggtctgcccaacgcggccaaggccgactcgcaggagatc
tgcttcgtgcccgacggcgactacgcgggcttcgtcgaggccgaggcgctgcgccgttcg
cgcccggtgccggcgagcggcgacatcgtcgatggcgagggccaggtgctcggccgccac
cggggcgtacatcactacaccatcggccagcgccgtggcctcggcaacctgcgcacgcag
acgcgctcgccgacgccgctctacgtcatcggcgtcgaccgcgcgcgcgaccgcgtggtc
gtggggccgcgcgagcaggccgcgcgccgctcggtgccggtgcgcgacgtgcgctggctg
agcacgccgccggccgagggtcggctcagcgccggtgtgcaggtgcgctatcgctcctcg
ccgctgccggccacgctcgagctgtgcggcgagggcgacgagcgcggcaagcgcgtgcgc
gtgcacttcgacgacgccgcggtcatcgcctcgcccggacaggcggcggtgttctacgat
ggcgacaccgtgctcggcggcggctggatcgcgcgcgacgagcagccgctgagcgagacg
cagccgccggccgatcgctcgcagccggcgatttga
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