Haliangium ochraceum: Hoch_3690
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Entry
Hoch_3690 CDS
T01103
Name
(GenBank) deoxyribonuclease/rho motif-related TRAM
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hoh03009
]
Hoch_3690
Enzymes [BR:
hoh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Hoch_3690
Ribosome biogenesis [BR:
hoh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Hoch_3690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Cons_hypoth95
RrnaAD
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
ACY16191
UniProt:
D0LY41
LinkDB
All DBs
Position
5076643..5078118
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AA seq
491 aa
AA seq
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MSTSSSSNPPGGSGRPRGKRGGKRDSRRERAGGGRGGVGQRLEVTVDALAAGGDGVGRDA
QGRVTFVPYAAPGDTLLVEIDEVRKDYARATPIEIVRASPARVEAPCAHFNAGRCGGCQW
LHLGSSAQASAKDELCERALRRQVEAGMELRPVRSEVPPYHWRRRARLHWYRPRKSEAAT
IGFFGPRSHRVSPIDGCVQLAPPLLAALSVIRERLAPTLGRTGSMELLAGHGGDVHLSIR
GRCDLDAAADLVGQGPVVGVRVEDQAGQPGARRRPPARFGKPHIELEAGFFGRADVFAQS
SADGNRALLDEVENALRDVAQSQSQSQSQSAEESAGGGGLAILELHAGAGNLTRALATHA
ARLVAVERRKPPWTLPVGLEAASADAAAVAARAFVAGDVADVCDKLSDADARFDVIVLDP
PRTGAREVLEPLSALAPGYIIYVSCNPATLARDLDVLSEHGYAARWAQPLDLMPQTSHIE
VVTLLERRPAS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagtacatcgtcttcctcgaatccgcccggaggctccgggcgcccccgcggcaagcgc
ggcggcaaacgcgatagccggcgcgagcgcgctggcggcggccgcggcggcgtgggccag
cgcctcgaggtcaccgtcgacgcgctggccgcaggcggcgacggggtcgggcgcgacgcc
cagggccgcgtcaccttcgtgccctacgcggcgcccggcgacaccctcctggtcgagatc
gacgaggtccgcaaggactacgcccgggccacgccgatcgagatcgtgcgcgcctcgccg
gcgcgcgtcgaggcgccgtgcgcgcacttcaacgccggccgctgcggcggctgccagtgg
ctgcacctcggcagcagcgcccaggccagcgccaaggacgagctgtgcgagcgcgcgctg
cgccgccaggtcgaggccggcatggagctgcgcccggtgcgcagcgaggtgccgccgtac
cactggcgccggcgcgcgcgcctgcactggtaccggccgcgcaagtccgaggccgccacc
atcggcttcttcggcccgcgctcgcatcgggtctcgcccatcgacggctgcgtgcagctc
gcgccgccgctgctcgccgccctgagcgtgatccgcgagcggctggcgccgaccctgggc
cgcaccggcagcatggaattgctggccggtcacggcggcgatgtgcacctcagcatccgc
ggccgctgcgacctcgacgccgccgccgatctggtcggccagggccccgtggtcggtgtc
cgcgtcgaagaccaggccgggcaaccgggcgcgcgcaggcggccgcccgcgcgcttcggc
aagccgcacatcgaactcgaggccggctttttcggacgcgcggacgtgttcgcgcagtcc
tcggccgacggcaaccgggcgctgctcgacgaggtcgagaacgcgctgcgcgacgtcgcc
cagagccagagccagagccagagccagagcgcggaggagagcgcgggcggcggcggcctg
gcgatcctcgaattgcacgccggcgccggcaacctcacccgcgcgctggccacgcacgcc
gcccggctggtggccgtggagcggcgcaagccgccgtggacgctgccggtcggtctcgaa
gcggcctcggccgacgccgccgccgtggccgcgcgcgcgttcgtggccggcgatgtcgcc
gatgtctgcgacaagctgagcgacgccgacgcgcgcttcgacgtgatcgtgctcgacccg
ccgcgcaccggcgcgcgcgaggtgctggagccgctgagcgcgctggcgcccggctacatc
atctacgtgtcgtgcaacccggcgacgctggcgcgcgatctcgacgtgctgtccgagcac
ggctacgcggcgcgctgggcgcagccgctcgacctgatgccgcagacctcgcacatcgag
gtggtcacgctgctcgagcgtcgccccgcgtcgtag
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