Haliangium ochraceum: Hoch_3849
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Entry
Hoch_3849 CDS
T01103
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hoh03016
]
Hoch_3849
Enzymes [BR:
hoh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Hoch_3849
Transfer RNA biogenesis [BR:
hoh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hoch_3849
Prokaryotic type
Hoch_3849
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF4081
Motif
Other DBs
NCBI-ProteinID:
ACY16348
UniProt:
D0LZ86
LinkDB
All DBs
Position
complement(5299513..5300628)
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AA seq
371 aa
AA seq
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MSTERSSPEPEERRRPARDAASGQGGANKSALHGVLVVDKPAGITSAAVVARVKRHLGVR
RVGHTGTLDPMATGVLPLCLGEATKIAGYLLAEDKGYEAELLLGVETDTLDAEGQVTARA
PEAAAAVDEAALRRVLATFVGPGEQVPPMFSALKRGGKRLHELARAGQEVERPPRPVVIH
ELLLHAFATPRARFSVHCSKGTYVRSLADDIGRALGCGAHLSALRRTRSGAFAIAQAIPL
AAIEDDPERARAALVSPAVAVAHLPAVAIPSEGVHDIACGKPMSWQRLSLLAPEAAAIAC
DAPVRLLLPSGELVALAERVATKNAPDMSNRGADQLHYLRGFSYDLTNRAASSNLSGSSG
RERARQRRSER
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgagcgcagcagccccgagcccgaggagcggcgccggcccgcgcgggacgcc
gcgagcgggcagggcggcgcgaacaagagcgcgctgcacggcgtgttggtggtggacaag
ccggccgggatcacctcggcggccgtggtcgcccgggtcaagcgtcacctgggcgtgcgc
cgcgtcggccacaccggcacgctcgatcccatggccaccggggtcttgccgctgtgtctg
ggcgaggccaccaagatcgccggctacctgctggccgaggacaagggctacgaggccgag
ctgctgctcggggtcgagaccgacaccctcgacgccgagggccaggtcaccgcgcgcgcg
cccgaggccgccgcggccgtggacgaggccgcgctgcgccgcgtgctggccacattcgtc
ggccccggcgagcaggtgccgcccatgttttcggcgctcaaacgcggcggtaagcggctg
cacgagctggcccgcgccggccaggaggtcgagcggccgccgcgtccggtggtgatccac
gagctgctgctgcacgcctttgcgacgccgcgcgcgcgcttctccgtgcactgctccaag
ggcacctacgtgcgcagcctggccgacgacatcggccgcgcgctcggctgcggcgcccac
ctgagcgccctgcggcgcacgcgctcgggcgcctttgccatcgcccaggcgatcccgcta
gccgcgatcgaggacgatcccgagcgcgcgcgcgcggcgctggtgtcgccggccgtggcc
gtggcgcatctgcccgcggtggcgatcccgagcgagggcgtccacgacatcgcctgcggc
aagcccatgagctggcagcggctgagcctgctggcgcccgaggccgcggccatcgcgtgc
gacgccccggtgcgcctgctgctgcccagcggcgagctggtggcgctggccgagcgcgtg
gcgacaaaaaatgcccccgacatgtcgaacaggggcgccgatcagttgcactacttacgc
gggttttcttatgacttgacgaaccgggcggcttcctccaatctctccggctccagtggc
cgggagcgtgcccggcaaaggcgctccgagcgctga
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