Haliangium ochraceum: Hoch_3853
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Entry
Hoch_3853 CDS
T01103
Name
(GenBank) translation initiation factor IF-2
KO
K02519
translation initiation factor IF-2
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hoh03012
]
Hoch_3853
03029 Mitochondrial biogenesis [BR:
hoh03029
]
Hoch_3853
Translation factors [BR:
hoh03012
]
Eukaryotic type
Initiation factors
MTIFs
Hoch_3853
Prokaryotic type
Hoch_3853
Mitochondrial biogenesis [BR:
hoh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
Hoch_3853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF-2
GTP_EFTU
IF2_N
EF-G_D2
MMR_HSR1
Ras
GTP_EFTU_D2
MeaB
RsgA_GTPase
FeoB_N
Arf
Roc
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ACY16352
UniProt:
D0LZ90
LinkDB
All DBs
Position
complement(5302923..5306099)
Genome browser
AA seq
1058 aa
AA seq
DB search
MRVYEIAKELDIPNKELIAKIRALGLEVNNHMSSLDADEVARVKRSLERERVASTETKRL
SSTVLRRRSKSERSGGRRRVVAEGGQDEAAPSAPTRERGSGGNNGEGVVTRRPAAQARPS
EPAPTPSARAESSPPPAQAPRAPEPRAVAEKPAETPPPAAKPAVEARPAEPAAPTPAPAA
EAAPAPAARADKPAEAPPVEKAPAAAKPAAEKPAPVAEPAAEKPAAAKPAEPAAASADDS
AAKDRAAATAKPRSPVIVKGPPVVELGGARTGNAPARGNANAQGQGQGQGQGQGQAQAGG
PARESASREAAPQPEQRPAPAAPAPTPAAPAPATASATASTPGEGGGGEDEDPSTVKNVA
ENARNRFEAELARARRRVSEREEQERKKREAAAEKEAQARDPSRPAVGTVINLPTARIKI
TERKPAARPGATPTRDRFGTRGRQGRQKRDFGRKRQAPKKPGKQTIKTTPAEHKRVIRME
ETIALSDLARNMGIKANEVLKKLWGMGMLGVNINTAIDFDTAQILASEFGYEVQNVAFQE
NTVFTVEPDAEDDLAWRAPVVTVMGHVDHGKTSLLDTIRKARVAAGEAGGITQHVAAYKV
SAGEDFGDVVFLDTPGHEAFTAMRARGAQATDIAVLVVAANDGVMPQTIEALSHAKDAGV
SIIVAVNKCDLPDAQPERVRQQLAEHSLIPEEWGGDTMYVDVSAHTGEGIDNLLEGIAVS
AEVLELRANPEKPARGVIIEAKLDRSRGPMATVLVQEGTLKTTDVVVAGRYYGKVRAILD
DQGNTIKEAGPSTPVELLGLDGVPDAGEALNVADDEKTAKQVVEHRRQQQRKKELASTAK
ISFENLMERIHEGENHELKVVLKADVQGSAEAVKQALIKQSTEKVKVNVIQAGVGGITES
DVNLAKAGGAIIVGFHVRPAGKSAKHAEQEGVEIRLYDVIYECLEDVRAAMAGLLAPIKR
EQEVGKMEVRETFHIPRVGTVAGCMVTEGKVLRRSLLRVIRDAVLVYEGKVASLRRFKED
TAEVREGYECGLMVQGFNDIQVGDVVESYEIVEEAAKL
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtctacgagatcgcgaaagagctcgatattcccaataaggagctcattgccaag
attcgggccctgggtctcgaggtcaacaatcatatgtcctcgctcgatgccgatgaggtg
gcccgagttaagcgctcgctcgagcgtgagcgggttgccagcaccgagaccaagcgcttg
tcgtcgacggttttgcgccgtcgcagcaagagcgagcgttcgggaggccgccgccgcgtg
gtcgccgaaggcgggcaggacgaggcagcgcccagcgcaccgacgcgcgagcgcggcagc
ggcggcaataacggtgagggcgtcgtgacccggcgtccggccgcgcaggcgcgtcccagc
gagcctgcgccgacgccgagcgcccgcgctgagagcagcccgccgccggcacaggcgcca
cgtgcgcccgagccgcgcgcggtcgccgagaagccggccgagaccccgccgcccgcggcc
aagccggccgtcgaagcgcgcccggccgagcccgctgcgccgaccccggccccggcagcc
gaggccgccccggccccggccgcgcgcgccgacaagccggccgaggcgccgcctgtggag
aaggctccggcggctgccaagcccgcggccgagaagccggcgccggtcgccgagcccgcg
gccgagaagccggcggcagccaagcccgccgagccggctgcggccagcgccgacgacagc
gcggccaaggaccgcgcggcggccacggccaagccgcgctcgccggtcatcgtcaaaggt
ccgcccgtggtcgagctgggcggcgcccgcaccggcaacgcgccggctcgcggcaatgcc
aatgcacagggacagggacagggacagggacagggacagggacaggcacaggccggcggt
cccgctcgcgagagcgccagccgagaggctgcgccgcagcccgagcagcgtcccgccccg
gcggcgccggctccgaccccggcggccccggccccggcgacggcctcggcgacggcttca
acccctggcgagggcggcggcggtgaggacgaggatccgtccaccgtgaaaaacgtggcc
gagaacgcccgcaaccgcttcgaggccgagctggcgcgtgcgcgtcgccgcgtgtccgag
cgcgaggagcaggagcgcaagaagcgcgaggccgcggccgagaaggaggcgcaggcgcgc
gatccctcgcggccggcggtgggcacggtcatcaacctgccgaccgcgcgcatcaagatc
accgagcgcaagccggcggctcgtcccggcgctaccccgacccgcgatcgcttcggcacg
cgcggccgtcagggccggcagaagcgcgacttcggtcgcaagcgccaggcgcccaagaag
cccggtaagcagaccatcaagaccacgccggccgagcacaagcgcgtcatccgcatggag
gagaccatcgcgctctcggacctggcccgcaacatgggcatcaaggccaacgaggtgctc
aagaagctgtggggcatgggcatgctcggggtcaacatcaacaccgcgatcgacttcgac
accgcccagatcctggcctcggagttcggctacgaggtgcagaacgtcgcgttccaggag
aacacggtgttcaccgtcgagcccgacgccgaggacgatctcgcgtggcgcgccccggtg
gtgacggtcatgggtcacgtcgatcacggcaagacctcgctgctcgacaccatccgcaag
gcgcgggtggccgccggtgaggccggcggcatcacccagcacgtggccgcctacaaggtc
agcgcgggcgaggacttcggcgacgtcgtgttcctcgatacgcccggccacgaggcgttc
accgccatgcgcgcccgcggcgcccaggccaccgacatcgcggtgctggtggtcgcggcc
aacgacggcgtcatgccgcagacgatcgaggccctgagccacgccaaggacgcgggcgtc
agcatcatcgtggcggtcaacaagtgcgacctgcccgacgcccagcccgagcgcgtgcgc
cagcagctcgccgagcacagtctcatccccgaggagtggggcggcgacaccatgtacgtg
gatgtctcggcgcacaccggggagggcatcgacaacctgctcgagggcatcgcggtcagc
gccgaggtgctcgagctgcgggccaaccccgagaagccggcccgcggcgtcatcatcgag
gccaagctcgaccgctcgcgcggtcccatggccacggtgctggtgcaggagggtacgctc
aagaccaccgacgtggtggtcgccgggcgctactacggcaaggtccgcgccatcctcgac
gaccagggcaacaccatcaaagaggccggcccgtccacccccgtggagctgctcggtctc
gacggtgtgcccgacgccggcgaggcgctcaacgtcgccgacgatgagaagaccgccaag
caggtggtcgagcatcgccggcagcagcagcgcaagaaggagctggcctcgaccgccaag
atctcgttcgaaaacctcatggagcgcatccacgagggcgagaaccacgagctcaaggtg
gtgctcaaggccgacgtccagggctctgccgaggccgtcaagcaggcgctgatcaagcag
tccaccgagaaggtcaaggtcaacgtcatccaggccggcgtcggcggtatcaccgagtcc
gacgtcaacctggccaaggccggtggcgccatcatcgtcggcttccacgtgcgcccggcc
ggtaagtcggccaagcacgccgagcaagagggcgtcgagatccgcctctacgacgtcatc
tacgaatgtctcgaggacgtgcgtgcggccatggccggactgctggcgcccatcaagcgc
gagcaggaggtgggcaagatggaggtccgcgagaccttccacattccgcgcgtgggcacg
gtcgccggctgcatggtcaccgagggcaaggtgcttcggcgctcgctgctccgggtcatc
cgcgacgcggtcctggtctacgagggcaaagtggccagcttgcgccgcttcaaggaagac
accgccgaggtccgcgagggctacgagtgcggcctcatggtccagggcttcaacgacatc
caggtcggcgacgtggtcgagtcctacgagatcgtcgaggaagcggccaagctgtag
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