Haliangium ochraceum: Hoch_3901
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Entry
Hoch_3901 CDS
T01103
Name
(GenBank) Tetratricopeptide repeat protein
Organism
hoh
Haliangium ochraceum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_7
TPR_16
TPR_14
Motif
Other DBs
NCBI-ProteinID:
ACY16400
UniProt:
D0LZD8
LinkDB
All DBs
Position
complement(5371899..5378606)
Genome browser
AA seq
2235 aa
AA seq
DB search
MKKKSDNRTGFPGGGDHDELDAAFDDWDDKFDGLFAEPTGVDGERAADERRAAAAPAATA
EAGTRDEGDEQDEGEDLEIEIGDAADAEAEGDDLEIEIGGATDAEAGPGYEFELSVDDAS
DVEPDIEIALDAPEALGGLLGPMSDVVLDDIDDGDAESLPPPFEQDSGAFELPPEPAPAP
GSEDEDEVFTSALRPRRESTPPPVAQPAGRPRYKSVMSAFESVADEADDDDDDDFDPFAE
PGEGASSQVTKVVEVDESLLAAAVPGADTKKRRTRAPTIVRRDELERLRAERAALRMAGD
DDDDDDDDFGGGNTQLLSQEQLESLADKSAAEAPVVAVDADFYDDIVIDDAADKPEGEGE
GVEIEMQVDAPVVPPGRRVSAHVVRRDSLSGVGGEAHPKPVPRARRRRSRNSEQELASYL
EGSRALDPESTLDLRKAVEDAREPGAEPSTRQRSEEIQAIIDRAAEELRSQRADRDETAP
PVLDPGDVALPEDSFEDFELDWETEPATKPAETALRPDATAAMARRDPDAEALYLGLPPA
VLPTGADEDWPALAIGTLSLPAESPAQEPEQRAATLASALLRYERVLADPGTGEAAARMF
LVAGQLSRNLGALDDARTHCESALEHAPGSLSAARERRRVALLQGELQTPLQALEAEQLR
LEKVEQQALGLYRLEAAMAHGERELAAGEMAALGDDGAGARRALAQFELALARGEDAEAA
AALAVLARTLEADASAGDAALANALARVHCLLEERGGGDAASGFIAVASAGASTAWLSAA
AAARRHEDGVHRLAQHGAGTPLDESEPGTEAFAAALAWRRSLWSEAAGAESERAHALQVA
AAQAPGQAFLVAEAAALAAASGQHERAAQLYQQLAGAAPTEAEQAMGLARAGRHLIALSR
DDEAVRVLERLRMLEPSDPATVLALEPVLERLDDLDALIALDGQTVAANPEGSVFERVRM
ARRMARSGREDKAIAEIEAGRMLAPEDPALQQALLDFLDRSQRTHVRAGVLAGLAEEVGA
VLGPDTASWRAALAYDAHAREVIARQEAGEAAGEAAEPLRALREGALASALEAWNRVLDD
EPDSAGAHVASIRLAQMLGDDDVLDDVLARAQSVIHDSGHAAEMALARVVAATGRPGRPP
GDDPEGLEHLMRELATLAPEDPRPAFVGALLAAADERPIDAAQAYEERAMALGEGARAAV
MRYRAAALYLEPGDDAGHAAVLFDEVLRVAPACAPAQELLRSARMRTGDISVSMALPTAP
GAGDEAESATSAAVRGAGEDDFARVLREADACLGPLGEPERALGLYEQALHVRPEDDDAR
RLVAFGLRQAALRAPALERWIAHLETSLQAASERADDSAVAACHDALARAKFRVQAPRDE
VFRHLNAAATAAPGRPELRRAVERAHIEAGRWDALLALYRSAPPGTVREEAALGLSEVHL
AGILARPFDESREVLTRITRREPHNLVALFQLDAAARAAWAALVQGGGEHGADAAEIAAR
AEHLGTLESATAAAMAPDALAQAGFLTRAGESAAAGGRSDEARERFRQALEVAEQGDAGG
YSAALFAWRLVALREALWLELAESAEREAALPEAEGEQAELEHLAAVVRMDAGEDPSGAR
AALQRVLALEPRHDDAFARMRALLVGEGGDTAEPEALSALLQARLDGEAQPEMRAYLHSA
LAELSHGQLGQRARAREHLRAALEIVPGSSDCLRRLADLCCEDGDWQDAAELLLRWVRLE
PVVELRCEVFFRLGTLYADHLSDSRTAVKAFKQVLNLSPEHRGALAALVRFGAELGDYKL
AIAACERLVRISEDAEAKVPHLKRLAELYQASGEGGARAERTLRGALDMAPESDAALRAL
IGFYRKRGDMRSIRVHLDRLAGTMRARIAERPSDALAYRVIARAMAVREDAGVEGSLAIA
RSAAELALALDADGGALGDGGGEQPSAERAAELSAALRGLATPSPSRLSGLLEPGAHEYL
APVQVTPAVRQFFAQLGDRIGKYVGAELRRYEVGRGQRLRDREVPAMAVFESVAAELGVD
APVLYVSDAQPQVFAVEPSQPISVILGASLLSSMDENALRFAAGKALIWAQTGLASVAQM
AERDFGVFLVALLRQFEPEVEGQGVDMAAVEREAQKMRRLVPASMVQELHAVALGMMGEK
LEPAALRAGILELGDRAGLLACGSIATATSVLEPGGDASELSAALERPAVAALVRYAVSD
DHAALFRRLRADGAA
NT seq
6708 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaagtcggacaaccggacgggatttcccgggggcggcgatcacgacgagctc
gacgccgcctttgatgactgggacgataagttcgacggtctctttgccgagcccacgggc
gtcgatggtgagcgggcggccgacgagcgccgggctgctgctgcgccagccgcgaccgcc
gaagccgggacccgcgacgagggcgacgagcaggacgagggcgaggatctcgagatcgaa
atcggggacgcggccgacgcggaggcagagggcgacgatctcgagatagaaatcgggggc
gcgaccgacgcggaggccgggcctgggtacgagttcgagctgtcggtggacgatgcctcc
gacgtcgagccggatatcgagatcgcgttggacgctcccgaagcgctcggcggactgctc
ggtccgatgtccgatgtcgtgctcgacgatatcgacgacggcgacgccgagtcgctcccg
ccgcccttcgagcaggattcgggggccttcgagctgccgcccgagcccgcgcccgcgccc
gggtccgaggacgaggacgaggtgttcacctcggcgcttcggccgcggcgcgagagcaca
ccgccgcccgtcgcgcagccggcgggtcggccgcgctacaagtcggtgatgtctgcgttc
gagtcggtcgccgacgaggccgatgatgacgatgacgacgacttcgatccctttgccgag
cccggcgagggcgcttcgtcgcaggtcaccaaggtggtcgaagtcgacgagtcgttgctc
gcggccgccgtccccggcgccgacaccaagaagcggcgcacgcgcgcgccgaccatcgta
cgccgcgacgagcttgagcgcctgcgcgccgaacgcgcggcgctgcgcatggccggggac
gacgacgacgacgatgatgacgacttcggcggcggcaacacgcagctcctcagccaggag
caactcgagagcctggccgacaagagcgcggccgaggccccggtggtcgcggtggatgcc
gacttctacgacgacatcgtcatcgatgacgcggctgacaagcccgagggggagggcgag
ggcgtcgagatcgagatgcaggtggatgcgcccgtggtgccgcccggccggcgcgtctcg
gcgcacgtggtgcggcgcgactcgctcagcggggtgggcggcgaggctcatcccaagccg
gtgccgcgcgcgcgccgacgccgttcgcgcaactccgagcaggaactggccagctatctc
gagggctcgcgggccctcgatcccgagagcaccctggatctgcgcaaggccgtcgaggat
gcgcgcgagcccggcgccgagccgtcgacgcggcagcgctccgaggagatccaggccatc
atcgaccgcgcggccgaggagttgcgcagccagcgcgccgatcgcgatgagaccgcgccg
cccgtgctcgaccccggcgacgtcgcgctgccagaggactcgttcgaggacttcgaactc
gactgggagaccgagcccgcgaccaagcccgcggagaccgcgctgcgccccgacgccacc
gcggcgatggcgcgacgcgaccccgacgccgaggcgctgtacctcggcctgccgccggcg
gtgctgccgaccggagccgatgaggactggccggcgctcgccatcggcacgctgtcgctg
ccggccgagagccccgcgcaggagcccgagcagcgcgctgccacgctcgcgagcgcgctc
ttgcgctacgagcgcgtgctggcggatccgggcaccggggaggcggccgcgcgcatgttc
ctggtcgccggacaactgtccagaaacttgggcgctctcgacgatgcgcgcacgcactgc
gagagcgcgctcgagcacgcgcccggctcgctgagcgcggcccgcgagcgccgccgcgtc
gcgctgttgcagggcgagctgcagacgccgctgcaggccctcgaggccgagcaattgcgg
ctcgagaaggtcgagcagcaggcgctggggctgtatcgcctcgaggcggcgatggcccac
ggcgagcgcgaactggccgccggcgagatggcggccctgggggatgatggcgccggcgcg
cgccgagcgctggcgcaattcgagttggcgctggcgcggggcgaagacgccgaagcggct
gcggcgctcgcggtgctcgcgcgcacgctcgaggctgacgccagcgccggtgacgccgcc
ttggccaacgcgctggcgcgggtccactgcctgttggaggagcgcggcggtggcgacgcc
gcgagcggtttcatcgcggttgcgagcgctggcgcgtccacggcttggctgagcgctgcg
gcggccgcacgacggcacgaagacggtgtgcaccgactcgcgcagcacggcgccgggacg
ccgcttgacgagtccgagccggggaccgaggcctttgccgcagcgctggcgtggcggcga
tcgctgtggagcgaggcggccggcgccgagagcgagcgcgcgcacgccttgcaagtggcg
gccgcgcaggcgccggggcaggcgttcctggtcgccgaagctgccgccctggcagcggcc
tcggggcagcacgagcgcgcggcccagctctatcagcagctcgccggcgctgcgcccacc
gaggccgaacaggcgatggggctggcccgggcagggcgccacctgatcgcgctctcgcgc
gacgacgaggccgtgcgcgtgctcgagcgactgcgcatgctcgagccctcggatcccgcg
accgtgttggcgctcgagccggtactcgaacgactggacgatctcgacgcgctgatcgcg
ctcgacggccagaccgtggccgccaatcccgagggcagcgtgttcgaacgcgtgcgcatg
gcgcggcgcatggcgcgcagcggtcgcgaagacaaagccatcgccgagatcgaggccggt
cgcatgttggcgcccgaggatccggcgctgcaacaagcgctgctcgactttctcgaccgc
tcgcagcgcacgcacgtgcgcgccggcgtgctcgccggtttggccgaggaggtcggcgcc
gtgctcggtccggacaccgcctcgtggcgcgcggccttggcctacgacgcccacgcgcgc
gaggtcatcgccaggcaggaggcgggcgaggccgcgggggaggcagccgagccgctgcgg
gcgctgcgcgaaggcgctctggccagcgcgctcgaggcctggaatcgcgtgcttgacgac
gagcccgattccgcgggcgcgcacgtggccagcatacgcctggcgcagatgctcggcgac
gacgacgtcctcgacgacgtcctggcgcgtgcgcagagcgtgatccacgattccggacat
gcggccgaaatggcgctggcgcgcgtggtcgcggccacggggcgtccgggccgtccgccc
ggcgacgaccccgaggggctcgagcacctcatgcgcgagctggccacgctggcgcccgag
gatccgcggcccgcgttcgtgggcgcgcttctggccgctgccgacgagcgtcccatcgat
gccgcccaggcctacgaggagcgcgccatggcgctcggcgagggcgcgcgggcggccgtg
atgcgctaccgggccgcggccctgtatctcgagcccggcgacgacgccggtcacgcggcc
gtgctcttcgacgaggtgctgcgcgttgcgcccgcatgcgcgcccgcacaagagctgctg
cgctcggcccgcatgcgcaccggcgatatctcggtgagcatggcgttgccgaccgcgccc
ggggctggggacgaggccgagagcgcgaccagcgcggccgtgcgcggcgctggcgaggat
gacttcgcgcgtgtgctgcgcgaggccgacgcgtgtctgggacccctgggcgagccagag
cgtgcgctgggcttgtacgaacaagcgctgcacgtgcgtccagaggacgacgacgcgcgc
cgcctggtcgcgtttggtctgcgccaggcggcgctgcgcgcgcccgcgctcgagcgctgg
atcgcgcatctcgagacctcgctgcaggcggccagtgagcgcgctgacgacagcgctgtg
gccgcttgccacgatgccttggcgcgggcgaagttccgcgtgcaggcacccagggacgag
gtgtttcggcatctgaacgccgccgccacggccgcgccgggccggccggagctgcgtcgg
gcggtcgagcgcgcgcacatcgaggcgggccgctgggatgcgctgctcgcgctgtaccgc
agcgcgccgccggggacggtgcgtgaggaggccgctctgggcctctccgaggtccacctc
gccgggatcctggcgcggcccttcgacgagtcgcgcgaggtgctcacccgcatcacccgc
cgcgaaccacacaatctggtggcgctgttccagctcgacgcggccgcgcgtgcggcctgg
gctgcgctggtgcagggcggcggtgaacacggcgccgacgctgccgagatcgccgcccga
gccgagcacctcggcaccctggagagcgcgaccgcggcggccatggcgcccgatgccctg
gcacaggcggggttcctcacgcgcgccggtgagagcgcggccgcgggcgggcgcagcgac
gaggcgcgagagcgcttccgccaggcgctcgaggtcgcggaacagggcgacgcgggcggc
tacagcgcggcgctgtttgcctggcgcctggtcgcgctgcgggaagccctgtggctcgaa
ctggccgagtcggccgagcgcgaggccgcgctgcccgaggccgaaggcgagcaggccgag
ctcgagcatctggccgcggtcgtgcgcatggacgccggcgaggatccgagcggtgcgcgc
gcggcgctgcagcgggtgctggcgctcgagcccaggcacgacgacgcctttgcccgtatg
cgcgccctgctcgtgggcgagggcggcgataccgcggagcccgaagccctgagcgcgctg
ctgcaggcgcgtctcgacggcgaggcgcagcccgagatgcgcgcgtatctgcacagcgca
ttggccgagctgagccatgggcagctcggccagcgagcgcgagcgcgcgagcacctgcgg
gccgcgctcgagatcgtccccgggtccagcgattgcctgcgtcggctggccgatctgtgc
tgcgaggacggcgattggcaggacgccgcggagctgttgctgcgctgggtgcgcctcgag
cccgtggtcgagctgcgctgcgaggtgttcttccgactgggaacgctctatgccgaccac
ctgtccgatagccgcaccgcggtcaaggcgttcaagcaggtgctgaatctctcgcccgag
catcgcggcgcgctcgcggcgctggtgcggttcggcgcagagctcggcgactacaagctg
gcgatcgcggcctgcgagcgcctggtgcgcatctccgaagatgcggaggccaaggtgccg
cacctcaagcggctggccgagctgtaccaggccagcggtgagggcggagcgcgtgcggag
cgcaccctgcgcggggcgctcgacatggcgcccgagagcgacgccgccttgcgcgcgctg
atcgggttctatcgcaaacgcggcgatatgcgcagtatccgggtgcatctcgaccgcctg
gcggggacgatgcgcgcccggatcgccgaacgcccgagcgacgcgctcgcctaccgggtt
atcgcccgcgccatggcggtgcgcgaggacgccggtgtcgagggctcgctggcgatcgcg
cgcagcgccgcggagttggccctggcgctcgacgcggacggtggtgcgctcggcgatggc
ggcggcgagcagccgagtgcggagcgggcggccgagctgagcgccgcgctgcgcgggctg
gcgacgccgtcgccgagccgtctgtcgggcctgctcgagcccggggcgcacgagtatctg
gcgcctgtgcaggtgacgccagcggtgcggcagttcttcgcgcagctcggcgatcgcatc
ggcaagtacgtgggcgcggagctgcgccgctacgaggtggggcgcggtcagcggctgcgc
gatcgcgaggtgccggccatggctgtgttcgagtcggtcgctgccgaactgggcgtggac
gcgccggttctgtatgtgtccgatgcgcagccgcaggtgttcgcggtggagccttcgcag
cctatttcggtgatcctgggcgcctcgctgctgtcgtcgatggacgagaacgcgctgcgc
tttgccgccggcaaggcgctgatctgggcgcagaccgggctggcctcggtggcgcagatg
gccgagcgcgacttcggtgtgttcctggtggcgctgctgcgccagtttgagcccgaggtg
gaagggcagggggtggatatggccgcggtcgagcgcgaggcgcagaagatgcgtcgcctg
gtgccggcgagcatggtgcaggaactgcacgcggtcgcgctggggatgatgggcgagaag
ctcgagcccgccgcgctgcgggccggtattctggaactcggcgaccgcgccggcctgctg
gcctgcggcagcatcgcgaccgcgacctcggtgctcgagccggggggcgatgcgtccgag
ctgagcgctgcgctcgagcggccggcggtggctgcgctggtgcgctacgcggtgagcgac
gatcacgcggcgctgtttcgccgcttgcgcgccgacggcgctgcgtga
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