Haliangium ochraceum: Hoch_3909
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Entry
Hoch_3909 CDS
T01103
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
hoh
Haliangium ochraceum
Pathway
hoh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Hoch_3909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoh03400
]
Hoch_3909
DNA repair and recombination proteins [BR:
hoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Hoch_3909
RecFOR pathway proteins
Hoch_3909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ACY16408
UniProt:
D0LZE6
LinkDB
All DBs
Position
complement(5393571..5394203)
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AA seq
210 aa
AA seq
DB search
MIGRLRGTLVEQEGSMVIVECGGVGYEVTVSIHTLQSLPAEGEPVTLRIFTHALESRVAL
YGFGSTLERDLFDLLITVKKVGPSSAVGILSAGSGPAEIAEMIANGETSSLTRLRGVGKK
TAEMLVVELREKCELLLATHRVQGGRAAARAPAAAARPSSRGPLLDEVAQALLQLGWRQQ
SVDQVVSELAPTAEDSLESLLRQALRAMPR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
gtgatcggccggctgcgcggcaccttggtcgagcaggaggggtcgatggtgatcgtcgag
tgcggcggcgtgggctacgaggtgacggtgtcgatccacaccctgcagtcgctgccggcc
gagggcgagccggtgacgctgcggatcttcacccacgcgctcgagagccgcgtcgcgctg
tacggtttcggctcgacgctggagcgcgatctcttcgatctgctgatcacggtgaagaag
gtgggcccgtcgtcggcggtcgggatcttgtcggccggctcggggccggcagagatcgcg
gagatgatcgcgaacggcgagaccagctcgctcacgcggctgcgcggggtgggcaagaag
acggccgagatgctggtggtcgagctgcgcgagaagtgcgagctgttgctggccacgcac
cgcgtccagggcggccgggcggccgcgcgcgcgcccgcggccgcggccaggccgagctcg
cgcgggccgctgctcgacgaggtggcgcaggcgctgctgcagctcggctggcgacagcag
agcgtggaccaggtggtctcggagcttgcgcccacggccgaggactcgctcgagtcatta
cttcgccaggcgctgcgagctatgccaagatag
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