Haliangium ochraceum: Hoch_3940
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Entry
Hoch_3940 CDS
T01103
Name
(GenBank) domain of unknown function DUF1730
KO
K18979
epoxyqueuosine reductase [EC:
1.17.99.6
]
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hoh03016
]
Hoch_3940
Enzymes [BR:
hoh01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.99 With unknown physiological acceptors
1.17.99.6 epoxyqueuosine reductase
Hoch_3940
Transfer RNA biogenesis [BR:
hoh03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Hoch_3940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_16
QueG_DUF1730
HEAT_2
Fer4
Fer4_9
Fer4_7
Fer4_8
Fer4_6
Fer4_10
Fer4_2
Fer4_21
HEAT_EZ
HEAT_PBS
Fer4_3
HEAT
Arm
DUF938
DUF3731
Motif
Other DBs
NCBI-ProteinID:
ACY16439
UniProt:
D0LI60
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All DBs
Position
5433942..5435279
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AA seq
445 aa
AA seq
DB search
MSPDAGETRPERLRELLVRGARARGFHRVATAPLTPPRRFAAYRAWLAQDMHGGMGYMAE
DAHIAGRAEPASLLAEARSVAIVALAYPAEDGPGAPDAPDAPDASEADAPPGDEDGVIRG
FVARYARGRDYHNVLKERLFALAEELAEAVGAPVAARPCVDSAPVLERDLAESAGLGFTG
KNTMLITPGLGSYTVLGELLLAAEVAPTLVQVSENKQRCGSCRACLDACPTNAFPAPFVL
DARRCVSYLTIEHEGAIPLALRPGLGTRIFGCDVCQEVCPFNARAPARTPADPELSAAAA
PAARGTGPAAAVGPRAAPDLVRLLGLGANQRRRYVDGTAMRRASRERLSRNVCVALGNAG
DVRAIPALLGALAERSPVVRAHAAWALGRLGAREELRAALADETEAEVRAEMRAALDALA
SGGDALADAGGDAHAGAGNGADEDR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagcccagacgccggcgagacgcggcccgagcggctgcgcgagctgctggtgcgcggc
gcccgcgcgcgcggctttcaccgggtggccacggcgccgctgacgccgccccggcgcttt
gccgcgtaccgcgcgtggctcgcccaggatatgcacggcggcatgggctacatggccgag
gacgcgcacatcgccggccgcgccgagcccgccagcctgctggccgaggcccgctcggtg
gcgatcgtggccctggcctacccggccgaggacgggcccggcgcgccagacgcgccagac
gcgccagacgcgagcgaagcggacgcgccgccgggggacgaggacggcgtgatccgcggc
ttcgtggcccgctacgcgcgcggtcgcgactatcacaatgtgctcaaggagcgattgttt
gcgctggccgaggagctggccgaggccgtgggcgcgccggtggccgcgcgcccgtgcgtg
gacagcgcgccggtgctcgagcgcgacctggccgagagcgcgggcctgggcttcaccggc
aagaacaccatgctgatcacgccgggcctgggctcgtacacggtgctgggcgagctgctg
ctggcggccgaggtggcgccgacgctggtccaggtgtccgagaacaagcagcgctgcggc
tcgtgccgggcgtgtctggacgcctgtcctaccaacgcgtttcccgcgccctttgtgctc
gacgcccggcgctgcgtctcgtacctgaccatcgagcacgagggcgccatcccgctggcg
ctgcgcccgggcctgggcacgcgcatcttcggctgcgacgtgtgccaggaggtgtgtccc
ttcaacgcccgggcgccggcgcgcacgccggccgatcccgagctgtcggcggcggccgcg
cccgcagcccgcggcaccggcccggcggcggcggtgggtccgcgcgcggctcccgatctc
gtgcgcctgctcggcctgggcgccaatcagcgccgccgctacgtcgacggcacggccatg
cgccgcgccagtcgcgagcggctgtcgcgcaatgtctgcgtggccctgggcaacgccggc
gatgtccgcgctatcccggcgctgctgggcgcgctggccgagcgcagcccggtggtgcgc
gcgcacgcggcctgggccctgggtcgcctgggcgcgcgcgaggagctgcgcgccgcgctc
gcggacgagaccgaggccgaggtccgagccgagatgcgcgcggcgctcgacgcgctggcc
tcgggcggcgacgcgctggccgacgcgggcggcgacgcgcatgcgggtgccggcaacggc
gcggacgaagatcgctga
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