Haliangium ochraceum: Hoch_3975
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Entry
Hoch_3975 CDS
T01103
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hoh
Haliangium ochraceum
Pathway
hoh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Hoch_3975
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hoh01007
]
Hoch_3975
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hoh03016
]
Hoch_3975
Enzymes [BR:
hoh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Hoch_3975
Amino acid related enzymes [BR:
hoh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Hoch_3975
Transfer RNA biogenesis [BR:
hoh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Hoch_3975
Prokaryotic type
Other AARSs
Hoch_3975
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACY16474
UniProt:
D0LI95
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All DBs
Position
complement(5478977..5480662)
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AA seq
561 aa
AA seq
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MSSQERPEQTLHRIIGERRDKAAELRDLGQNPYRNDFRPTHQCAEVRAKYEGTQPSEPPS
KGIQPVDGETIRLAGRLVARRGFGKTVFAPIRDSSGDLQLFLNVDHLDQDAFEKLLPRLD
VGDQVGAEGVIFWTKRGELSLLCTHFHILSKSLRPLPDKWKGLTNVETRYRQRYLDLAVN
PEVREVFRKRSQILRGLRRFFDARAFLEVETPMMHPVIGGAAARPFVTHHNALDLTLYLR
IAPELYLKRLLVGGFDRVYEINRSFRNEGLSRAHNPEFTMLEFYQAYADYRDLMDLTEEL
FTELAQEVNGTLETTWDGKAIDLARPWQRLSVRRAVTEVAGRSPEVFDDPVRAAEEALAV
DAPAGDVLSALLESLSADELSALGGREALGKIWEDPAQRPALATKISERYADEHTRRVRA
GHVAFAIFEAAVEESLVQPTFLTDFPLAVSPLARRNEDDPAFCDRFELFIGGSEMANAFS
ELNDPDDQRTRFQAQLEARAQGQDETMDYDEDYCRALEVGMPPAAGEGIGIDRLTMLLTG
QSSIRDVILFPQMRPESSQVE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccaggaacgccccgagcagactctgcaccgcatcatcggcgagcgccgcgac
aaggcggcggagctgcgcgacctcggtcagaatccgtatcgcaacgactttcgcccgacg
caccagtgcgccgaggtgcgtgccaagtacgagggtacccagcccagcgagccgcccagc
aagggcatccagccggtcgatggcgagaccattcgcctggccggccggctggtcgcgcgc
cgcggcttcggcaagaccgtgttcgcgcccatccgcgacagcagcggcgacctgcagctc
ttcctcaatgtcgaccacctggaccaagacgccttcgagaagctgctgccgcggctcgac
gtcggcgaccaggtcggcgccgagggcgtgatcttctggaccaaacgcggcgagctgtcg
ctgctgtgcacgcacttccacatcctgagcaagtcgctgcggccgctgcccgacaagtgg
aagggcctcaccaacgtcgagacccgctatcgccagcgctatctcgacctggcggtcaac
cccgaggtccgcgaggtgttccgcaagcgctcgcagatcctgcgcggtctgcgccgcttc
ttcgacgcgcgcgccttcctcgaggtcgagacgccgatgatgcacccggtgatcggcggc
gccgcggcgcggcccttcgtcacccatcacaacgcgctcgacctcaccctgtatctgcgc
atcgcgcccgagctgtacctcaagcgcctgctggtcggcggcttcgaccgggtgtacgag
atcaaccgcagcttccgcaacgagggcctgtcgcgcgcgcacaaccccgagttcacgatg
ctcgagttctatcaggcctacgccgactaccgcgacctgatggacctcaccgaggagctg
ttcaccgagctggcgcaggaggtcaacggcacgctcgagaccacctgggacggcaaggcg
atcgatctcgcgcgcccctggcagcgcctgagcgtgcgccgggcggtgaccgaggtggcc
gggcgcagccccgaggtgttcgacgatccggtgcgcgccgccgaagaggcgctggcggtc
gatgctccggccggcgatgtgctgagcgcgctgctcgagtcgctctcggccgacgagctc
agcgcgctgggcggccgcgaggcgctgggcaagatctgggaggatccggcgcagcggccg
gcgctggctaccaagatcagcgagcgctacgccgatgagcacacccgccgggtgcgcgcc
ggacacgtggcctttgccatcttcgaggccgcggtcgaggagagcctggtgcagccgacc
ttcctcaccgatttcccgctggcggtgtcgccgttggcgcgccgcaacgaggacgacccc
gcgttctgcgaccgcttcgagctgttcatcggcggctccgagatggccaacgcgttcagc
gagctcaacgatcccgacgaccagcgcacgcgcttccaggcgcagctcgaggcccgcgcc
cagggccaggacgagaccatggactacgacgaggattactgccgcgcgctcgaggtcggc
atgccgccggcggcgggcgagggcatcggcatcgatcgcctgaccatgctgctcaccggc
cagagctcgatccgcgacgtcatcctgttcccgcagatgcgcccggagtcctcgcaggtc
gaatga
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