Haliangium ochraceum: Hoch_4153
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Entry
Hoch_4153 CDS
T01103
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
hoh
Haliangium ochraceum
Pathway
hoh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hoch_4153
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hoh02022
]
Hoch_4153
02035 Bacterial motility proteins [BR:
hoh02035
]
Hoch_4153
Two-component system [BR:
hoh02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
Hoch_4153
Bacterial motility proteins [BR:
hoh02035
]
Pilus system
Twitching motility proteins
Hoch_4153
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_16
HTH_30
AAA_22
AAA_2
TIP49
ATPase
nSTAND3
AAA_19
AAA_7
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ACY16651
UniProt:
D0LKT1
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Position
5723474..5724874
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AA seq
466 aa
AA seq
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MGSVLVVDDERSMREFLAIFLRRAGHEVAVASSGKDGLQHLLAHRPDVVITDIKMPGEMS
GLDLLSAAKAQQVDTEIIVVTAHGTPELAISAMKQGAYDYLTKPFKVDDIGAVIGRAMEK
RALVAANTALREQVAGRYRLASLLGKSPAMQRLFELITKIRTTRTSVLITGESGTGKELV
ARALHSEGARAEQPFVAVNCGAIPEALMESELFGHVKGAFTGAVHDKLGLFQQAESGTLF
LDEIGELSLGLQVKLLRALQERVVKPVGGTVEQAVDVRVVAATNRELEAEVARGTFRSDL
YYRLNVIELRLPPLRQRREDIPLLADHFLRRFASEQGKAGMQFSPEALRALQDYDYPGNV
RELENIVERAVILAADKHIGTESLPVPQSKPALGASDADEFAIPEDGIDLDRVLGDYERK
ILERALAQSDGVRKRAARLLGISFRSLRYRLNKLGLETGWAPGDGD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtgggctcggtcctggtcgtcgatgacgagcgctcgatgcgcgagtttctcgccattttc
ctgcggcgcgcggggcacgaagtcgcggtcgccagctcgggaaaagacgggctgcagcac
ctgctcgcgcaccggcccgacgtggtcatcaccgacatcaagatgccgggcgagatgagc
gggctcgacctgctgagcgcggccaaggcccagcaggtcgacacagagatcatcgtggtg
accgcccacggcacccccgagctggccatctcggccatgaagcagggcgcctacgactac
ctgaccaagccgttcaaggtcgacgacatcggcgccgtcatcggccgggccatggagaag
cgcgccctggtcgcggccaacaccgccctgcgcgagcaggtcgcgggccgctaccggctg
gcctcgctgctcggcaagagcccggccatgcagcggctcttcgagctcatcaccaagatc
cgcaccacccgcaccagcgtgctcatcaccggcgagagcggcaccggcaaggagctggtc
gcgcgcgcgctgcacagcgaaggcgcacgcgccgagcagccctttgtcgccgtcaactgc
ggcgccatccccgaggcgctgatggagtccgaactcttcggccacgtcaagggcgcgttc
acgggcgcggtgcacgacaagctgggtctgtttcagcaagccgagagcggcactctgttc
ctcgacgagatcggcgagctgtcgctggggctccaggtcaagctgctgcgcgcgctgcag
gagcgcgtggtcaagcccgtcggcggcaccgtcgagcaagccgtggacgtgcgcgtggtc
gccgccaccaatcgcgagctcgaggccgaggtcgcgcgcggcaccttccgcagcgacctc
tactatcgcctcaacgtcatcgagctgcgcctgccgcccctgcgccaacgccgcgaggac
atcccgctgctggccgatcacttcctgcgccgcttcgcgagcgaacagggcaaagccggc
atgcagttctcgcccgaggcgctgcgcgcgctgcaggactacgactacccgggcaacgtg
cgggaactcgagaacatcgtcgagcgcgccgtcatcctggccgcggacaagcacatcggc
accgagagcctgccggtcccgcagagcaaaccggccctgggcgccagcgatgccgacgag
ttcgccatccccgaggacggcatcgacctcgatcgcgtgctcggcgactacgagcgcaag
atcctcgagcgcgccctggcgcagagcgacggcgtgcgcaagcgggccgcgcgcctgctc
ggcatcagctttcgctcgctgcgctaccggctgaacaagctcggcctcgagaccggctgg
gcccccggcgacggggactga
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