Haliangium ochraceum: Hoch_4327
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Entry
Hoch_4327 CDS
T01103
Name
(GenBank) Sigma 54 interacting domain protein
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hoh03000
]
Hoch_4327
Transcription factors [BR:
hoh03000
]
Prokaryotic type
Helix-turn-helix
Other families
Hoch_4327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF_3
GAF_2
GAF
AAA_5
Mg_chelatase
AAA
HTH_8
AAA_2
AAA_16
YceM-like_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACY16822
UniProt:
D0LMB6
LinkDB
All DBs
Position
complement(5937243..5938766)
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AA seq
507 aa
AA seq
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MNTPLNDYSHDLHVLTSMLASKRAPDLILAQALEALSHLIDYDLAAVYELHGDELRVVAA
AGPLASEQVRAHRLALSKFPNIRRVLEVRRPVAFEDSDHADHGDPYDGVLDLPHGHSCMV
IPLRADEADMGIITIDRLRCETYDARAVRLADVYGQLVSLALWFANREAILRRNNQQLSE
HNRLLLEESGATWACRRLEAGASAQMHELVAQAKKVAVSNAPVLVLGETGTGKELLAQAI
HEWSARASGPFIKLNCAAIPENLVESELFGHVRGAFSGAESARRGRFVTANRGTLLLDEI
GELPLPAQAKLLRVLQEGVLEPVGSDDSYRVDVRIVAATNVDLVAAVDAGWFRRDLYYRL
ATFPLQVPPLRERRADIAPIARDVLRELHASTGRGPWTLSAPAVEALERNGWPGNVRELR
NVLERATIIVQAGEIGAAKLRLEVAPPSRELAASCAELPDFSANERAYLARLLERSGGKL
YGEGGAAELSGLKPSTLRSKLVKHGLR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccccctcaacgactactcgcacgatctgcacgtgctgacctcgatgttggcg
tcgaagcgggcgccggatctgatcctggcgcaggcgctcgaggcgctctcgcacctcatc
gactacgatctggcggcggtgtacgagctgcacggcgacgagctgcgggtggtggccgcg
gccggtccgctggcctcggagcaggtgcgcgcgcaccggctggcgctgtcgaaatttccc
aacattcgccgggtgctcgaggtgcgccggccggtggcgttcgaggatagcgatcacgcg
gaccacggcgacccctacgacggcgtgctcgacctgccgcacggacatagctgcatggtg
attccgctgcgcgcggacgaggccgacatgggcatcatcaccatcgaccggttgcgctgc
gagacctacgacgcgcgcgcggtgcgcctggccgacgtctacgggcagctcgtgtcgctg
gcgctgtggttcgccaaccgcgaggcgattctgcgccgcaacaaccagcagctcagcgag
cacaaccggctgctgctcgaggagtcgggcgcgacctgggcgtgtcgccggctcgaggcc
ggggcctcggcgcagatgcacgagctggtggcgcaggccaagaaggtggcggtgtcgaac
gcgccggtgttggtgctgggtgagaccggcactggcaaggagctgctggcgcaggccatc
cacgagtggagcgcgcgcgcgagcgggccgttcatcaagctcaactgcgcggcgattccc
gagaacctggtcgagagcgagctcttcgggcacgtgcggggcgcgttctcgggcgccgag
agcgcgcgccgcggacgctttgtcaccgccaaccgcggcaccctgctgctcgacgagatc
ggcgagctgccgctgccggcccaggccaagctgctgcgcgtgttgcaggagggcgtgctc
gagccggtgggctcggacgacagctatcgggtggacgtgcgcatcgtggccgcgaccaac
gtcgatctcgtcgccgcggtcgacgccggctggtttcgccgcgatctgtactaccggctg
gcgacctttccgctgcaggtgccgccgctgcgcgagcggcgcgccgacatcgcgcccatc
gcgcgggatgttctgcgcgaactgcacgcctcgaccgggcgcgggccgtggacgctgagc
gcgccggccgtcgaggcgctcgagcgcaacggctggccgggcaacgtgcgcgagctgcgc
aacgtgctcgagcgcgcgaccattatcgtccaggcgggcgaaatcggcgcggccaagctg
cgcctcgaggtggcgccgccgagccgcgagctggccgcgagctgcgccgagctgcccgac
ttcagcgccaacgagcgcgcctatttggcccgtctgctcgagcgcagcggcggcaagctg
tacggcgagggcggcgccgccgagctgagcgggctcaagccgagcacgctgcgcagcaag
ctggtcaagcacggcctgcgctga
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