Haliangium ochraceum: Hoch_4826
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Entry
Hoch_4826 CDS
T01103
Name
(GenBank) Type II secretion system F domain protein
KO
K02653
type IV pilus assembly protein PilC
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hoh02044
]
Hoch_4826
02035 Bacterial motility proteins [BR:
hoh02035
]
Hoch_4826
Secretion system [BR:
hoh02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Hoch_4826
Bacterial motility proteins [BR:
hoh02035
]
Pilus system
Pilus assembly proteins
Hoch_4826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
bPH_10
Motif
Other DBs
NCBI-ProteinID:
ACY17316
UniProt:
D0LSU4
LinkDB
All DBs
Position
complement(6605578..6606789)
Genome browser
AA seq
403 aa
AA seq
DB search
MPKFAWQGTDRNGAQKKGVMEAINEDAVANRLRAENITVNKVRAAGIGDFELKIGTGVSS
RDLLIFTRQLATMIDAGLPLVQCLDILAGQAENKAFAKVLFSVKSGLESGASFSESLRKH
PKVFDQLYINLVAAGEVGGILDTILLRLTAYIEKAVKLKRQVKGALTYPIGILVIALGVV
AVMLGKVIPSFQEMYSSFEGAALPEPTQVVIGISESFRDLWFVWLGGVLAIAATVSWMNS
SDRGRVLRDHMLLKIPLIGSMMRKIVVARFTRTLGTLLTSGVAILDALDICSRTAGNRVV
QAAIEKVRQAVSEGKDLAAPLGASKVFPSMVVEMISVGEQTGTMDQMLQKIADFYEEEVD
VAVAAMTKAIEPLLMGFLGVVVGGLLIAMYLPVFELAGSVNAG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagttcgcctggcaaggaaccgatcgcaacggcgcccagaaaaagggcgtgatg
gaggcgatcaacgaggacgccgtcgccaaccggctgcgcgcggaaaacatcaccgtaaac
aaggtccgcgccgccggtatcggcgacttcgagctgaagatcggcaccggcgtgagctcg
cgcgacctgctgatcttcacccgtcagctcgcgaccatgatcgacgccggtctgccgctg
gtgcagtgtctcgacatcctggccggccaggcggagaacaaagccttcgccaaggtgctg
ttcagcgtcaagagcggcctcgagtccggcgcctcgttctccgagtcgctgcgcaagcac
cccaaggtattcgaccagctgtacatcaacctggtcgcggccggcgaggtcggcggtatc
ctcgacaccatcttgctgcgcctcaccgcctacatcgagaaggcggtcaagctcaagcgc
caggtcaaaggcgcgttgacctatcccatcggcattctggtcatcgctcttggcgtcgtg
gccgtgatgctcggcaaggtcatccccagcttccaggagatgtactcgagcttcgaaggt
gcggcgctgcccgagccgacgcaggtcgtcatcggcatctcggagagcttccgcgacctg
tggttcgtgtggctgggcggcgtgctcgccatcgccgcgaccgtctcgtggatgaactcc
tcggatcgcgggcgcgtcctccgcgatcacatgctgctcaagatcccgctcatcggctcg
atgatgcgcaagatcgtggtcgcgcgcttcacccgtaccctgggcacgctgctcacctcg
ggtgtggccatcctcgacgcgctcgacatctgctcacgcaccgccggcaaccgggtggtg
caggccgcgatcgagaaggtgcgccaggcggtatccgaaggtaaggacctcgctgcgccc
ttgggggcgtcgaaagtgttcccctcgatggtggtcgagatgatcagcgtcggcgagcag
accggtaccatggaccagatgctgcagaagatcgccgacttctacgaggaagaggtcgac
gtcgcggtggcggccatgaccaaggccatcgagccgctgctcatgggcttcctcggcgtg
gtcgtcggcggcctgctcatcgccatgtacctgccggtgttcgagctggccggtagcgtc
aacgcgggctga
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