Haliangium ochraceum: Hoch_4828
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Entry
Hoch_4828 CDS
T01103
Name
(GenBank) type IV-A pilus assembly ATPase PilB
KO
K02652
type IV pilus assembly protein PilB
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hoh02044
]
Hoch_4828
02035 Bacterial motility proteins [BR:
hoh02035
]
Hoch_4828
Secretion system [BR:
hoh02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Hoch_4828
Bacterial motility proteins [BR:
hoh02035
]
Pilus system
Pilus assembly proteins
Hoch_4828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_7
AAA_22
AAA_16
AAA_14
AAA_23
AAA_29
ABC_tran
AAA_19
NTPase_1
AAA
nSTAND3
AAA_11
AAA_30
AAA_18
cobW
DEAD
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ACY17318
UniProt:
D0LSU6
LinkDB
All DBs
Position
complement(6607927..6609618)
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AA seq
563 aa
AA seq
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MSRIGELLVREKMITSDQLREAQSEAQRSGLRLGSALANLGIVDDDQLSKFVASQYGLKT
VNLNSYTLDPELLKLIPKDVAQRHQVVPLERAGSNLTVAMSDPSNIYAIDELKFLTQYNI
RPVVASENAIEGAIQRYYDKGPNLHEMIGDLDEDVDFAAADEESVNIVDLENQAGEAPVV
KLCNAILLSAIKKGASDIHVEPYEKSFRVRFRIDGILHEEMNPPLRLRNAITSRLKIMSS
LDIAERRLPQDGRIKLKIGKDREMDFRVSCLPTLFGEKIVLRLLDRSNLQLDMTRLGFEP
EPLSYFKKAIHLPYGMVLVTGPTGSGKTTTLYSALSELNTTESNISTAEDPVEFNLPGIN
QVQMHEDIGLNFATSLRSFLRQDPNIIMVGEIRDFETAEIAVKAALTGHMVLSTLHTNDA
PSTVSRLLNMGVEPFLVTASVNLVLAQRLARRICVECKEETEKHPEALRDVGMSEDMIAA
CKPMVGRGCSFCGETGYRGRVALYEVMPFTDDLKELVLQNASAAEIKMEMIRGGVQTLRM
AGLNKIMEGMTTPEEVMRTTVAD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaattggcgaactcctcgttcgtgagaaaatgatcacgtccgatcagctaagg
gaggcgcagagtgaagcccagcgcagtggtctgcgactgggttctgcgttggcgaatctc
gggatagtcgacgacgaccagctatcgaagttcgtcgccagtcaatacggcctgaagaca
gtcaatctcaacagctacacgctcgatccagagctgttgaaattgatccccaaggacgtt
gcccagcgccaccaggtggtgccgctggagcgagctggctcgaacttgaccgtggcgatg
tcggatccgtccaacatctacgcgatcgacgagctgaagttcctaacgcagtacaacatc
cgcccggtcgtggcgtccgagaacgccatcgagggcgcgatccagcgctactacgacaag
ggtccgaacctccacgagatgatcggggatctcgacgaggacgtcgacttcgccgcggcc
gacgaggagtcggtcaacatcgtcgacctcgagaaccaggccggcgaagcgcccgtggtc
aagctgtgcaacgccatcctgttgtcggcgatcaaaaagggcgcctcggatatccacgtc
gagccctacgagaagagcttccgggtgcgcttccgcatcgacggcatcctccacgaggag
atgaacccgccgctgcgcctgcgcaacgcgatcaccagtcgactcaagatcatgtcgagt
ctggatatcgccgagcggcgtctgccgcaggacggccgcatcaagctcaagatcggcaaa
gaccgcgagatggacttccgcgtctcgtgtctgccgacgctctttggcgagaagatcgtc
ctgcgtctgctcgaccgctcgaacctgcagctcgacatgacccgcctgggtttcgagccc
gagccgctgtcgtacttcaaaaaggccatccacctgccctacggcatggtgctggtgacc
gggccgacgggctctggcaagacgactacgctgtactcggcgctgtccgagctcaacact
accgagagcaacatcagcacggctgaggatccggtggagttcaacctacccggcatcaac
caggtgcagatgcacgaggacatcggcctcaacttcgcgacctcgctgcgctcgttcttg
cgccaggatcccaacatcatcatggtcggcgagatccgcgacttcgagaccgccgagatc
gcggtgaaagccgcgctcacgggccacatggtgctgtccacgctgcacaccaacgacgcc
ccctcgacggtctcgcgcctgctcaacatgggcgtcgagccgtttttggtcaccgcgtcc
gtcaacctggtgttggcccagcgcctggcgcgccgcatctgcgtcgagtgcaaagaggag
accgagaagcaccccgaggcgctgcgcgacgtcggcatgagcgaggacatgatcgccgcg
tgcaagccgatggtcggccgcggctgtagcttctgcggcgagaccggctaccgcggccgc
gtcgcgctctacgaggtcatgcccttcaccgacgatctcaaggagctggtgctgcagaac
gcatcggcggccgaaataaaaatggagatgatccgcggcggggtgcagaccctgcgaatg
gccggcctcaacaagatcatggagggcatgaccacgccggaagaggtcatgcgaaccacg
gtggcagactga
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