Haliangium ochraceum: Hoch_4973
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Entry
Hoch_4973 CDS
T01103
Name
(GenBank) DNA photolyase FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoh03400
]
Hoch_4973
Enzymes [BR:
hoh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Hoch_4973
DNA repair and recombination proteins [BR:
hoh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Hoch_4973
Prokaryotic type
Hoch_4973
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DUF7239
Motif
Other DBs
NCBI-ProteinID:
ACY17462
UniProt:
D0LU98
LinkDB
All DBs
Position
complement(6855832..6857322)
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AA seq
496 aa
AA seq
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MANSLPPVPALRVRAVGDAPVHESRRFVLYWMIAARRTRYNFALERALAWSRALGKPLVV
LEALRCDYPWASERLHRFVVDGMSDQSAAFADTPVAYYPYLEPRPGAGRGLLAALAAHAC
VVVTDEFPCFFLPRMVAAAARSLDVQVQAVDGNGLYPLAATERVFTTAASFRRHLQKELP
AHLGDMPMAEPLAHAPPRDAAHALPAAIRKRWPPASLGRPGASDALLSALRFDRAVEAAP
VRGGARAAGETLERFVRAGLPRYLEARNQPADPVTSQLSPYLHFGHISAHEVFRRVMARD
QWTPDRMAPRATGSREGFWGASSEVEGFLDELITWREIGYNMAAKRDDYDRYESLPAWAQ
TTLEEHTGDPRPHLYELDEFEQARTHDALWNAAQTQLVREGRIHNYMRMLWGKKILEWTR
TPRDALAVMIELNNRYALDGRNPNSYSGIFWCLGRYDRAWGPERPIFGKVRFMSSQSTAR
KLRVTPYLHAYAPAES
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattcgctccctcccgtgccggcgctgcgcgtgcgcgccgtcggcgatgcgccg
gtgcacgagtcgcggcgctttgtcttgtattggatgatcgcggcccggcgcacgcgctac
aacttcgcgctcgagcgcgcgctggcctggtcgcgcgcgctgggcaagccgctggtggtg
ctcgaggccttgcgctgcgactatccctgggcgagcgagcgcctgcaccgcttcgtcgtc
gacgggatgtccgatcaatcggccgcgttcgcggataccccggtggcctactatccctac
ctcgaaccgcgtcccggcgcggggcgcgggttactggccgcgctagccgcgcacgcctgc
gtggtggtcaccgatgagtttccgtgcttcttcctgccgcgcatggtggccgcagccgcg
cgctcgctcgacgtgcaggtccaggcggtggacggcaatggtctgtatccgctggcggcg
accgagcgggtgttcaccaccgcggcctcgtttcgccgccatctgcagaaagagctgccc
gcgcatctcggcgatatgccgatggccgagccgctcgcgcacgcgccgccacgggacgcc
gcccacgcgctgccggccgcgatccgcaagcgctggccgccggcatcgcttgggcgtccc
ggcgcaagcgacgcgctgctgagcgcgttgcgtttcgaccgcgcggtcgaagctgcgccc
gtccgcggcggggcgcgggcggcgggcgagaccctggagcgcttcgtacgcgccggtctg
ccgcgttacctcgaggcccgcaaccagcccgcggacccggtcaccagccagctatcgccg
tatctgcatttcggacacatctcggcgcacgaggtgttccgccgggtcatggcccgcgac
cagtggacgccggatcgtatggccccgcgcgcgaccggcagccgcgagggcttctggggc
gccagcagcgaggtcgagggttttctcgatgagctcattacctggcgcgagatcggctac
aacatggccgccaagcgcgatgactacgatcgctacgagtcgctgccggcgtgggcgcag
accacgctcgaggagcacacaggcgacccgcggccgcatctctacgagctcgacgagttc
gagcaggcgcgcacgcacgacgcgctgtggaacgcagcccagacgcagctcgtgcgcgag
ggccgcatccataactacatgcgcatgctgtggggcaagaagatcctcgagtggacgcgc
acgccgcgcgacgcgctggcggtgatgatcgaactcaacaaccgctacgcgctcgacggc
cgcaatcccaactcgtacagcggcatcttctggtgcctgggccgctacgaccgcgcctgg
gggccagagcgcccgatcttcggcaaggtgcgcttcatgagctcgcagagcacggcgcgc
aagctgcgcgtcacaccctacctccacgcctacgcgcccgccgaaagctga
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