Haliangium ochraceum: Hoch_5122
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Entry
Hoch_5122 CDS
T01103
Name
(GenBank) type IV pilus assembly PilZ
Organism
hoh
Haliangium ochraceum
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Gene cluster
GFIT
Motif
Pfam:
PEGA
PilZ
CarbopepD_reg_2
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ACY17610
UniProt:
D0LWG0
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Position
7059937..7062468
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AA seq
843 aa
AA seq
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MSTNDNRKSQRNPVTLRIKFKSANLEQFIERYAVDVSQGGIFIRTKDPLPVGTTMRFEFQ
LRDESPLITGEGTVVWIREHKKQSSVAPGMGVRFDRLTEASQRVLEQILANKNGRAGSAA
EQLGEVPTRVVPIADIAEQARASSGDRAGVFGAEGVPDEAFEQATKVHSLEELASMSARA
DEDSIDDAPLSADFEEDDQTKVYPALTQPSGNPSDVALGHSGVGAPLPPTPSGSSQDVEL
GRAGYDEPLAPDEAFDARDVELGLAGPTEPLTQERLVASDEVELGRIVSPRGNRRAPAAR
PASGERPAIDLGPGGSEDPFSDVPLPEAGDFDLGLAGPTDPLPVERGNRASELELGAAGG
NDDEQERPTQTGVARRSGHVAQAGADVDAAEYSDERADTRERAAATPPADEAKAATAAAA
VAEAAAAASDEAKAAPAVSDAPVATAPAAADEPPATSDDEPEERDSRVRVVAQDSTDAVA
QRKSSRAPLIAILIIVLLAAAAGAFFFLSRDNAPAGAAPDAGAAIADDDVAGDQLMGDEA
GDETGDEAATGNDEIDDDEIVFEEDEAVADDSEEGAEDAAEDGDTAEGMATGGITTDEYT
QPGGPTSKVSVRSQPSGATVELIGGAEKGTTPFSIELAANAKHRLRVSHPGYLSQEIEVD
PSSKNEVSVTLASAPYVLHINSNPPGAIAYIDGRRVPGVTPNKLELPSGWETRPQHKISL
RLAGYDKLDVFASAEFHPEDGAMVQSVSGELVKSAPAPTPPRPRPTPKPAPTPAPTPAPA
PAPAPTPAPGEPKDTEPAPAPAPAPAPAPTPTPAPEESAEPPATETGDSAAAGAGAGETA
QTN
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaccaacgacaatcgcaagtcccagcgcaatccggtcacgctccgcatcaagttc
aagagcgccaacctcgagcagttcatcgaacgctacgccgtggatgtcagccagggcggc
atcttcattcgcaccaaagacccgctgccggtcggtacgacgatgcgcttcgagtttcag
ctccgcgacgagtccccgctcatcaccggtgaaggcaccgtggtgtggatccgcgagcac
aaaaagcagagctccgtggcgccgggcatgggcgtgcgcttcgaccgcctcaccgaggcc
agccagcgggtgctcgagcagatcttggccaacaagaacgggcgcgcggggagcgccgcc
gagcagctcggcgaggtgccgacgcgcgtggtgccgatcgccgacatcgccgagcaggcg
cgcgccagcagcggcgatcgcgccggcgtattcggcgccgagggcgtgcccgacgaggcc
ttcgagcaggccaccaaggtccacagcctcgaggagctggcgtcgatgagcgcgcgcgcc
gatgaggacagcatcgacgacgcgccgctctcggccgacttcgaagaggacgatcagacc
aaggtctaccccgcgctcacccagccatcgggcaatcccagcgatgtcgcgctcggacac
tcgggtgtgggcgcgccgctgccgccgaccccgagcggcagctcgcaggatgtcgagctc
ggccgcgccggctacgacgagccgctcgcgcccgacgaggccttcgacgcccgcgacgtc
gagctgggcctggccggacccaccgaacccctgacccaggaacgactggtcgccagcgac
gaggtcgaactcggacgcatcgttagcccccgcggcaaccgccgcgctcccgccgcccgg
ccggcgagcggcgaacgcccggccatcgacctcggccccggcggctcggaagatcccttc
tccgatgtgccgctgcccgaggccggcgacttcgacctgggcctggccggtcccaccgat
cctctgcccgtcgagcgcggcaaccgcgcatcggagctcgagctgggtgccgccggcggc
aacgatgacgaacaggagcggcccacccagaccggtgtggcccggcgcagcggacacgtc
gctcaggccggggccgacgtcgacgccgccgagtacagcgacgagcgcgcggacacccgc
gagcgcgcggccgcgacgccgccggccgacgaggccaaggcagccaccgccgccgccgcg
gtcgcggaggccgcagcggccgcaagcgacgaggccaaggccgccccggccgtgtccgat
gccccggtcgcgaccgcgccggccgccgcggacgagcccccggcgacgagcgacgacgag
cccgaggagcgcgactcccgcgtgcgcgtggtcgcccaggacagcaccgacgccgtggct
cagcgcaaatcgtcgcgcgcgccgctgatcgccatcttgatcatcgtcctgctcgccgcc
gcagcgggcgccttcttcttcctgagccgcgacaacgcgcccgcgggcgccgcgcccgac
gccggcgccgcgatcgcggacgacgacgtggccggcgaccagctcatgggtgacgaggcc
ggcgacgaaaccggcgacgaggccgcgaccggcaatgacgagatcgacgacgacgagatc
gtgttcgaggaagacgaggcggtcgccgacgacagcgaagaaggcgccgaagacgcagcc
gaggacggcgacaccgccgagggcatggccaccggcggcatcaccaccgacgagtacacc
cagcccggaggcccgaccagcaaagtgagcgtgcgctcgcagccgagcggtgccaccgtc
gagctcatcggcggcgcggagaaaggcacgacgccgttcagcatcgagctggccgccaac
gccaagcaccgcctgcgcgtgtcgcatcccggctacctgagccaggagatcgaagtcgac
ccttcgtccaaaaacgaggtgtcggtgaccctggcctcggcgccctacgtgctgcacatc
aacagcaacccgccgggcgccatcgcctatatcgacggccgccgggtccccggggtcacg
cccaacaagctggagctgccgtccggctgggagacgcgtccgcaacacaagatcagcctg
cgcctggccggctacgacaaactcgatgtcttcgccagcgccgagttccaccccgaggac
ggcgccatggtgcaatcggtgagcggcgagctggtcaagagcgcgcccgcgccgacgccg
ccgcgaccccggccgacgcccaaaccggcaccgacgccggctccgacgccggctccggct
ccggctccggctccgacgccggctccgggcgagcccaaggacaccgagccggctccggct
ccggctccggctccggctccggcgccaactccaactccggctcccgaagagagcgccgag
ccgccggcgaccgagaccggcgacagcgcggctgccggcgccggcgccggcgaaaccgcg
cagaccaactga
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