Haliangium ochraceum: Hoch_5137
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Entry
Hoch_5137 CDS
T01103
Name
(GenBank) Exodeoxyribonuclease V
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hoh
Haliangium ochraceum
Pathway
hoh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Hoch_5137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoh03400
]
Hoch_5137
Enzymes [BR:
hoh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Hoch_5137
DNA repair and recombination proteins [BR:
hoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Hoch_5137
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
NAT10_TcmA_helicase
AAA_22
DEAD
AAA_16
PhoH
nSTAND3
SLFN-g3_helicase
NPHP3_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACY17625
UniProt:
D0LWH5
LinkDB
All DBs
Position
7075721..7077970
Genome browser
AA seq
749 aa
AA seq
DB search
MKRSWLQISPRGTARERYEQRVGLAPLASAAAAETSADSDAAAASEAERDAGERERLASF
FRNVAAGAHAHDLGDESLYLAEELAELQWSLAGRHKRAVALLALATMISARQGSSRLPID
LAPDGYLARLLGSLLSAGEMQLAPAEVLRDIEALPRLPALDKVIGRPGEYRPLIFSDGCI
YQHRMLWCEDQLAARLRERLGGARDDTSMAGRAAPRTTAGTAAGAAGDSAGAVAGDAASE
DAASAALAAVLARPAMVGADAVVLSDEQAAAVRAATRQRFCVISGGPGTGKTAIVVTILR
TLARLGESPESALLAAPTGKAANRMGSSIRSALLAVPDPDPVDRQLLERASEPQTLHRLL
GYVPVLDRFRQHENNPLRARTVIVDEASMIDAELMERLLRAVPSETRLVLLGDADQLPSV
DAGAVLRDLVAAGTGDDGGFARRLTHSYRMDVRDPAGRAILGAAQAMNRGETALALPIRR
AAKELQWHGIELLDTVGATGATEGTTAPAADIAAVNDFVDHWYDKRIASDREFARLSTKT
FQRHDDAFTPEDAADLRALMSIYERSRLLTVTRRYDTGAEAINRRLHRRVITAASVDYGP
DFYPGEPVMMRRNDYERGLFNGDQGVVVRVSENGEPQRFRLAFARGEEFAVFSLDALRMH
VELAFAMTVHKSQGSEFSEVALVLPLEAIPLATREMLYTGVTRARRAVVLVGAPALLRTA
IAQRGERFSGLADKLAPAPDGAAYAEVRG
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgttcctggttacagatctcgccgcggggcaccgcgcgcgagcgctacgagcag
cgcgtgggtctggcgccgctggcgtcggccgcggctgccgagacgagtgccgatagcgac
gccgccgcagcgagcgaagccgagcgcgacgccggcgagcgcgagcgcctggcgagcttc
ttccgcaatgtcgccgcgggcgcccacgcccacgatctcggcgacgagagcctgtatctg
gccgaggagctggccgagctgcagtggtcgctggccggccgtcacaaacgggcggtggcg
ctgctcgcgctggcgaccatgatcagcgcgcgccagggctccagccggctgcccatcgac
ctcgcccccgacggctatctcgcgcgcctgctgggctcgctgctcagcgccggcgagatg
cagctcgcgcccgccgaggtgctgcgcgatatcgaggccctgccgcggctgcccgcgctc
gacaaggtgatcggacgaccgggcgaataccggccgctgatcttcagcgacggctgcatc
taccagcaccgcatgctgtggtgcgaggaccagctcgccgcgcggctgcgcgaacggctg
ggcggcgcgcgcgacgacacatcgatggccggccgggcggcgcccaggacgacagcgggg
acagcagccggcgcggcgggcgacagcgcgggcgcggtggccggcgacgcagcgagcgag
gacgcggcgtcggccgcgctcgcggccgtgctcgcccgcccggccatggtcggcgcggat
gccgtcgtgctgtccgacgaacaggcggccgcggtgcgcgcggccacccggcagcgcttc
tgcgtcatctccggcggccccggcaccggcaagaccgccatcgtggtgaccatcctgcgc
accctcgcgcgtctgggcgaatcgcccgagagcgcgctcctggccgcgcccacgggcaaa
gccgccaaccgcatgggcagctcgatccgctcggcgctgctggcggtgcccgaccccgac
ccggtcgatcgccagctcctcgagcgcgccagcgagccgcagaccctgcaccgcctgctc
ggctacgtgccggtcctcgatcgctttcgccagcacgagaacaacccgctgcgggcgcgc
acggtcatcgtcgacgaggcgtccatgatcgacgccgagttgatggagcgcctgctgcgc
gcggtgccgtccgagacccgcctggtgctgctcggcgacgccgaccagttgccctcggtc
gacgccggcgcggtgctgcgcgatctggtcgccgcgggcacgggtgacgacggcggcttt
gcccgcaggctcacccacagctatcgcatggacgtgcgcgaccccgccggccgcgccatc
ctcggcgccgcccaggccatgaaccgcggcgagaccgcgctggccctgcccatccgacgc
gcggccaaggagctacagtggcacggcatcgagctgctcgataccgtcggcgccaccggc
gccaccgagggcacgacagcccccgccgccgacatcgccgcggtcaacgactttgtcgac
cactggtacgacaaacgcatcgccagcgaccgcgaattcgcgcgcctcagcaccaagacc
ttccagcgccacgacgacgcctttacacccgaggacgccgccgatctgcgcgcgctgatg
agtatctacgagcgcagccggctgctcaccgtgacccgccgctacgacaccggcgccgag
gccatcaaccgccgcctgcaccgccgcgtcatcaccgcggcctcggtcgactacggcccc
gacttctaccccggcgagccggtgatgatgcgccgcaacgactacgagcgcggcctgttc
aacggcgaccagggcgtggtcgtgcgcgtgtccgaaaacggcgagccgcagcgcttccgc
ctggcctttgcgcgcggcgaggagttcgccgtgttctcgctcgacgccctgcgcatgcac
gtcgagctggcgttcgcgatgacggttcacaagagtcagggctcggagttctccgaggtc
gccctggtgctgccgctcgaggccatcccgctggcgacgcgcgagatgctgtacacgggc
gtcacccgcgcccgccgcgccgtggtcctggtgggcgcgcccgcgctgctgcgcacggcc
atcgcccagcgcggcgagcgcttctcggggctggccgacaagctcgcgcccgcgcccgat
ggcgccgcctacgccgaggtccgcggatga
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