Haliangium ochraceum: Hoch_5222
Help
Entry
Hoch_5222 CDS
T01103
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
hoh
Haliangium ochraceum
Pathway
hoh00730
Thiamine metabolism
hoh01100
Metabolic pathways
hoh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Hoch_5222
Enzymes [BR:
hoh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Hoch_5222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ACY17708
UniProt:
D0LXF3
LinkDB
All DBs
Position
7177138..7178841
Genome browser
AA seq
567 aa
AA seq
DB search
MSTGNGAHGNGANGNGANDKHSLAQVGPAPVDGLTPIAGFPSSEKVYLERDGVRVPVRRI
ELSGGEPALDVYDTSGPENCDLHRGLPKLRQPWIDARIAEDDGNRTQMHYARRGLITEEM
KFIALREGLAAEFVRDEVASGRAIIPANIKHPESEPMIIGKNFLVKINANIGNSAVSSSI
GEEVDKLRWATKWGADTIMDLSTGKQIHETREWILRNAPVPVGTVPIYQALEKVGGDPEK
LNIDVFMDTLVEQAEQGVDYFTIHAGVLLRYVPLTANRVTGIVSRGGSILAKWCMAHHRE
NFLYTEFERICELMKKYDVAFSLGDGLRPGSIADANDAAQLGELETLGELTELAWKHDVQ
VMIEGPGHVPMHKIKENVELQEKLCHEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG
TAMLCYVTPKEHLGLPDRDDVKAGVIAYKIAAHAADLAKGHPGAQKRDDALSKARFEFRW
DDQFNLSLDPDTARAFHDQTLPAPAAKGAHFCSMCGPKFCSMKITQDVRDFAVAQGVSED
EAVRSGMEHKAAEFREQGKRLYAETES
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaggcaacggcgcccatggcaatggcgcgaacggcaacggcgccaacgacaag
cacagcctggcccaggtcggcccggcgccggtggacggcttgacgccgatcgccggcttc
cccagctccgagaaggtctatctcgagcgcgacggtgtgcgggtgccggtgcggcgcatc
gagctcagcggcggcgagcccgcgctcgatgtctacgacacctcgggccccgagaactgc
gatctccatcgcggcctgcccaagctgcggcagccgtggatcgacgcgcgcatagccgag
gacgacggcaaccgcacgcagatgcactacgcgcgccgcggcctcatcaccgaggagatg
aagttcatcgccctgcgcgagggactcgcggccgagttcgtgcgcgacgaggtcgccagc
ggccgcgccatcatcccggccaacatcaagcacccggagagcgagccgatgatcatcggc
aagaacttcctggtgaagatcaacgccaacatcggcaactcggccgtgtcctcgtcgatc
ggcgaggaggtcgacaagctgcgctgggcgacaaaatggggcgcggacaccatcatggac
ctgtccaccggcaagcagatccacgagacccgcgagtggattctgcgcaacgcgccggtg
cccgtgggcacggtgcccatctaccaggcgctggagaaggtcggtggcgaccccgaaaag
ctcaacatcgacgtgtttatggacaccctggtcgaacaagccgagcagggcgtcgactac
ttcaccatccacgccggcgtgctgctgcgctacgtgccgctcacggccaatcgcgtcacc
ggcatcgtctcgcgcggcggctccatcctggccaagtggtgcatggcccaccaccgcgag
aacttcctgtacaccgagttcgagcgcatctgcgagctgatgaagaagtacgacgtggcc
tttagcctgggcgacggcctgcgtccgggctcgatcgccgacgccaacgacgccgcccag
ctcggcgaactcgagaccctgggcgagctcaccgagctggcctggaagcacgacgtgcag
gtgatgatcgagggccccggccacgtgcccatgcacaagatcaaagagaacgtcgagctg
caagagaagctgtgccacgaggcgcccttctacaccctggggccgctcaccaccgatatc
gctcccggctacgatcacatcacctcggccatcggcgcggccatgatcggttggttcggc
accgccatgctgtgctacgtgacgcccaaggagcacctcggcctgcccgatcgcgacgac
gtcaaagccggcgtcatcgcgtacaagatcgcggcccacgccgccgacctggccaagggc
cacccgggcgcacagaagcgcgacgacgcgctgtccaaagcgcgcttcgagttccgctgg
gacgaccagttcaacctctcgctcgaccccgacaccgcgcgcgccttccacgaccagacc
ctgccagcgcccgcggccaaaggcgcgcacttctgctccatgtgcggccccaagttctgc
tcgatgaagatcacccaggacgtgcgcgacttcgccgtcgcccagggcgtgagcgaggac
gaggccgtgcgctccggcatggagcacaaagccgccgagttccgcgagcagggcaagcgc
ctgtacgcggaaaccgagagctga
DBGET
integrated database retrieval system
