Haliangium ochraceum: Hoch_5264
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Entry
Hoch_5264 CDS
T01103
Name
(GenBank) protein of unknown function DUF490
KO
K09800
translocation and assembly module TamB
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hoh02000
]
Hoch_5264
Transporters [BR:
hoh02000
]
Other transporters
Pores ion channels [TC:
1
]
Hoch_5264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF748
YhdP
AsmA
Motif
Other DBs
NCBI-ProteinID:
ACY17749
UniProt:
D0LXJ4
LinkDB
All DBs
Position
complement(7236423..7240970)
Genome browser
AA seq
1515 aa
AA seq
DB search
MKARTAIRGVFRLFAGLVLLIVVAVAGVLAFLHIDRGRAFVRNQVVSALDDLLAGRLEIG
SIEGSLLDEFSLRHVVLYDGEERVAAEVDLITVDTDLWQLINNEVAIEHVSAEGVRVHAY
RNPDGSLNLAQLVAPQPEEPDTGPSPWVIDIDQVTVLDGAFSITEPDGSTSLSVRDFGLD
GELLTGGGHVHVAVDELRARWDDVARDALVRATFGIHDGAVTAYGVEARLGEGRVLAPLA
YFDWQKMRLLALAAADVPVALVDDLAPDTGLLSGISLVTAALRIDDSLPIWFALSADAGG
GRVQALGAAEPEIPAASLRLGAEGVDLGRIMRGTPSTELALSADAELRGSELETMTLRAD
VLARGSLDGERIPDLRAHVDLVDARAAGELHLEADDTVVHASGAALLGGEVVVVENGRVE
ATIPSISAVLARIPGLPPEIRANGSVYADLRASGPVDALAVTGELEGVALDYSGSRVDVL
KLQLDLSGVPNAIEGRANLEALGVVQGPTRIGNLRARVRASDPRDLDVRVEIGGEEAFVP
LAIAARVRQGEDSTRVALGDYRFTTGQLTWTGSGGGLSIGPDGAVRVNEIGLSSDAGRIH
VGSANIRGEARAEVALDLDELDLAKVDRAIESLIGNSVIPLSGLVSLQVQAGKRGQRLRG
DLAVEGAELAMSDNVPPVTAAARVSLAADSLRLQLDASSAPLGKLHLDTSLRPPRATLNP
NAWASLDERALLSFDLSLSEIDIARIREWKPEAMPGFLAGEVAVAVSADEGMRNVELQVS
AANFQHAALGTPIDGQIETIVADGVATLNGHLTTPQRGGVDLYATADLPKRLLDTDAWSK
MDERSLEKLSVSAHDVDLDFWLSLGGVDSELGARASLTLDAHDYGQRVESKARVEVPAQP
ERSLPAFALELDTAVRRKDLDVALALVIERETYLDGEVALAIGLDDLLHGDPARATTSAA
EIDLGIRQLPLRLISEVLELPAPLGGSLQGEAKLTGSLSEPSVEVDLAGDRIAVANTEFR
VFRLGGQYNGDGVRVRFQGDQGAGGELAIDSVIRLGEEGARGEADLRAQGFDIGFLGDLV
PNLYIGGALDADVHIDGNGATPVATGSLALSEGVFHAGPPMRQFREIELALDLRGDSIVL
EKLEAKSGAGDLRIDGRVALAGIMPDEFEFHIATDDLPLEFGATIVELDSRIHIAEGKYT
GDAWTTTVNIERAYGELPKEQGRELHDAEVPEDIVFVDGRCVELVSCAETVAFEDPKGEE
EELVEAPLPPLLIRVRANDTIQVRTEEALAVFGAELDIDTRSGDMAINGAVAANFGHLEL
FGRRYEIQRASVSFGSAPGRIPNPSLDVLLSHEFPSLTLYIGVTGTASDPELMLRSEPGV
YDEATLLSFVLGASPLSEDEGIEGEEPALSDRAVGVASSLVVGQVQGLIEDVLPIELDVL
RVELADSSAAAEKVIIGKWITNKLFLSYARNFDAAPEENVGEASLEYRFRKRWMLEGRFG
DRGAGGLDLLWTKRF
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgcgcaccgcaatccggggagtgttccgcctcttcgcgggtctcgttttattg
atcgtcgtggccgtcgccggcgtcctggcgttcttacacatcgaccgcggccgcgccttt
gtgcgcaaccaggtggtgagcgcgctcgacgatctgctcgccggccggctcgagatcggc
tccatcgagggcagcttgctcgacgagttctcgctgcgccacgtggtgctctacgacggc
gaggagcgcgtcgccgccgaggtcgacctgatcacggtggacaccgatctatggcagctc
atcaacaacgaggtcgcgatcgagcatgtcagcgccgagggcgtgcgcgtccacgcctat
cgcaaccccgacggtagcctcaacctggcccagctcgtcgcgccgcagcccgaagagccc
gacaccggcccctcgccctgggtcatcgacatcgaccaggtgaccgtgctcgacggcgcc
ttttcgatcaccgagcccgacggcagcacctcgctgtcggtgcgcgatttcggactcgat
ggcgagctgctcaccggcggcggtcacgtgcacgtggccgtggacgagctgcgcgcccgc
tgggacgatgtcgcgcgcgacgcgctggtgcgcgccacctttggcatccacgacggcgcg
gtgaccgcctacggcgtcgaggcgcgcctcggcgagggccgggtgttggcgccgctggcg
tacttcgattggcagaagatgcgcctgttggccctggccgccgccgatgtcccggtggcc
ctggtcgacgatctggcgccggacaccggactgctgtccggtatctctttggtcacggcc
gcgctgcgcatcgacgacagcctgccgatctggttcgccctgagcgcggacgcgggtggc
ggacgggtgcaggcgctcggcgccgccgaacccgaaatcccggccgcgtcgctgcgcctg
ggcgccgagggcgtggatctcggccggatcatgcgcggcaccccgagcaccgagctggcg
ctgagcgccgacgccgagctgcgcggcagcgagctcgagaccatgaccctgcgcgccgat
gtcctggcccgcggctcgctcgacggcgagcgcatccccgacctgcgcgcccacgtcgat
ctggtcgatgcccgcgctgccggcgagctgcatctcgaggccgatgacaccgtggtccac
gccagcggcgccgcgctgctcggcggcgaggtcgtggtcgtcgagaacggccgcgtcgag
gccaccatccccagcatttcggccgtgctcgcacggattcccggactgccgcccgaaatc
cgcgccaacggctccgtgtacgccgacctgcgcgcctcggggccggtcgacgcgctggcc
gtgaccggcgagcttgagggcgtggcgctcgactacagcggctcgcgggtggatgtgctc
aagctccagctcgatctcagcggcgtcccgaacgccatcgagggccgcgccaatctcgag
gctctgggcgtggtccagggcccgacccgcatcggtaacctgcgcgcccgggtgcgcgcc
agcgatccccgcgacctcgatgtccgcgtcgagatcggcggcgaggaggcctttgtgccg
ctggccatcgcggcccgggtgcgccagggcgaggacagcacgcgcgtggctctgggcgac
tatcgcttcaccaccgggcagctcacctggacgggcagcggcggcggcctgagcatcggc
cccgacggtgccgtgcgcgtcaatgaaatcggactgtcgtccgacgctggccgtatccac
gtgggcagcgccaacatccgcggcgaggctcgcgccgaggtcgcgctcgacctcgacgag
ctcgacctggccaaagtcgaccgcgccatcgagagcctcatcggcaactccgtcatcccg
ctctctggtctggtgtcgttgcaagtgcaggccggcaagcgcggccagcgcctgcgcggt
gacctggcggtggaaggcgccgagctggcgatgtccgataacgtgccgccggtgaccgcg
gccgcgcgcgtgagcctggcggccgatagcctgcgcctacagctcgacgccagcagcgcg
ccgctcggcaagctgcacctcgacaccagcctgcgcccgccgcgggcgaccctgaatccc
aacgcctgggcctcgctcgacgagcgcgcgctgctgtccttcgacctctcactcagcgag
atcgacatcgcccgtatccgcgagtggaagcccgaggccatgcccggcttcctcgccggc
gaggtcgccgtggccgtgagcgcggacgagggcatgcgcaacgtcgagctgcaggtgtcg
gcggccaacttccagcacgccgccctgggcacgcccatcgacggccagatcgagaccatc
gtggccgacggcgtggccacgctcaacggccacctgaccacgccccagcgcggcggcgtc
gatctgtatgccaccgccgacctgcccaagcgccttctcgacaccgacgcctggagcaag
atggacgagcgctcgctcgagaagttgagcgtctcggcccacgatgtcgatctcgatttc
tggctgagcctgggcggcgtcgacagcgagctgggcgcgcgcgcctcgctcaccctcgac
gcgcacgattacggacagcgggtcgaaagcaaggcccgcgtcgaggttcccgcgcagccc
gagcgctcgctgccggcctttgccctcgagctcgacaccgccgtgcgccgcaaggatctc
gacgttgcgctggcgctggtgatcgagcgcgagacctacctcgacggcgaggtcgcgctg
gcgatcgggctcgacgatctgctgcacggcgaccccgcgcgtgcgaccacgtccgcggcc
gagatcgatctcggtatccgccagttgccgctgcgcctgatcagcgaggtgctggagctt
cccgcgcccctgggcggctcgctgcagggcgaggccaagctcaccggctcgctcagcgag
cccagcgtcgaggtcgatctcgccggcgaccgcatcgcggtggccaacaccgagttccgg
gtatttcgactcggtggacagtataacggcgacggcgtgcgcgtgcgcttccagggcgac
cagggcgcgggcggtgagctggccatcgacagcgtgatccgtctgggcgaggagggcgcc
cgcggcgaggccgacctgcgcgcccagggcttcgatatcggcttcctgggcgacctggtg
cccaacctgtacatcggcggcgcgctcgatgccgatgtccacatcgacggcaacggcgcc
accccggtggccaccggttcgctcgcgctgtccgagggcgtgttccacgccggaccgccg
atgcgccagttccgcgagatcgagttggcgctcgacctgcgcggcgacagcatcgtgctc
gagaagctcgaggccaagtcgggcgctggcgatctccgcatcgacggccgcgtagcgctc
gccggcatcatgcccgacgagttcgagttccacatcgccaccgacgacctgccgctcgag
ttcggcgccaccatcgtcgagctcgatagccgcatccacatcgccgagggcaagtacacg
ggcgacgcctggaccaccacggtcaacatcgagcgcgcctacggcgagctgcccaaagag
cagggccgggagctgcacgacgccgaggtgcccgaggacatcgtgttcgtcgatggccgc
tgcgtcgagctggtgagctgcgctgagaccgtggcctttgaggaccccaaaggcgaggag
gaggagctggtcgaggcgccgctgccgccgctgctcatccgcgtgcgcgccaacgacacc
atccaggtgcgcaccgaggaggcgctggccgtgttcggcgccgagctcgacatcgacacg
cgctccggcgatatggccatcaacggcgcggtcgcggccaacttcggtcacctggagctg
ttcggccgccgctacgagatccagcgcgccagcgtcagctttggctcggcgcccgggcgg
atccccaatccctcgctcgacgtgctgctgtcgcacgagttcccgtcgctcaccctgtac
atcggcgtcaccggcaccgcctcggaccccgagctgatgctgcgctccgagcccggcgtc
tacgacgaggccacgctgctctcgttcgtgctcggcgcctcgccgctgtccgaagacgag
ggcatcgagggcgaagagccggcgctcagcgaccgcgccgtgggcgtggcctcgagcctg
gtcgtcggccaggtgcagggcctgatcgaggacgtgctacccatcgagctcgacgtcctc
cgcgtcgagctggccgactcctcggccgcggccgagaaggtgatcatcggtaaatggatc
accaataagctgttcctctcgtacgcgcggaatttcgacgcggccccggaggagaacgtc
ggtgaagcctcgctcgagtatcgcttccgcaagcgctggatgctcgagggccgcttcggt
gaccgcggcgccggcggtctcgacctgctgtggaccaagcgcttctga
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