Haliangium ochraceum: Hoch_5379
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Entry
Hoch_5379 CDS
T01103
Name
(GenBank) ABC-type uncharacterized transport system
KO
K25151
gliding motility-associated transport system permease protein
K25153
gliding motility-associatede transport system auxiliary component
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hoh02000
]
Hoch_5379
Transporters [BR:
hoh02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Gliding motility-associated transporter
Hoch_5379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_transp_aux
DUF7088
ABC2_membrane_2
ABC2_membrane_3
ABC2_membrane_4
ABC2_membrane_5
DUF4350
OST48_N
PapJ
DUF5687
Motif
Other DBs
NCBI-ProteinID:
ACY17863
UniProt:
D0LYJ7
LinkDB
All DBs
Position
complement(7394386..7397382)
Genome browser
AA seq
998 aa
AA seq
DB search
MRQIWSVAAKELRGYFNSAVALIFLATFLAAVLFTFFWVEGFFAANAANVTPLFRWLPIL
MIFLVAALTMRLWSEEHKTGTIEILLTLPVPVHKLVLGKFTAGLALVAVALMLTLGLPIT
VSMMGNLDWGPVVGGYLGALLLAGAYLAIGLCISSTTENQVVALIGTLLVGALFYVPGVE
AVADLFGVAGGELLRRIGTGSRFESVARGVLDLRDLAYYAALIVIFLTLNTVLLQARRWS
KSERTAARRHATQLTVVLLIGNALALNLWLAPVTAARVDLTEDAMYSLSEPSETLLNSLD
EPLLIRGYFSNRTHPMLLPLVPQIRNMLSEYEIAGGDKVRVELLDPSEDEDAETEAREKY
NIQPVPMQFAGRHEQSLVNAYFHVLIVYGDQHRVLEVEQLVQFDLVDLGNYRAYVDNLEY
ELTKTIREIVFGFQTIESMFASMPEQIQLTAYLTPEGLPAVWAEAPPLIDAIAADLETAS
GGKFRYQRVTPSTEEERAQAQQRHGVRPVPASLLGKDNVYFQLLLEMGDRLEPVRVPEQI
TEGALRAAIRGAVERMVPGFTRVVGLVTPDPIVESPDMAGQELPPPRPVQNFRALAQVLA
ETYRVRNVSLGRGTVPDDVEVLLVAGPDDLDETEQEAIDQFLMRGGAVILLVAPYRLDLS
TAGRGAVALQEVDPGLDALLRHYGVVVDKLLVLDEQNDDIPLPGKRGAGDQRSGLRQSYP
FFVRVDEDGMAEDSIVTGGLSSVIVHWASPVQVLADAEGADAREVEVLLQTSDDAWLQAE
SDILPDFERFPELGFGRPDTPVQSTAKGPPYALAVAITGSFDSAVAEQRQGGTVMDYLIE
RSSEDARLVVVGSSAFVSDEVLAISTSAGSRDVTNNVAFVQNLLDWAVEDTELLSIRTRG
SAARTLSQVGEDERARWELANYIIALLGLGLVVVIARLRRRARMRATERMVGDPDKYDAA
DADADADADNAADAEAAGDGGDAAKAKPAARADEEDKA
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
gtgagacagatctggtccgtcgccgccaaggagctgcgcggttacttcaactcggcggtc
gccctgatcttcctggccaccttcctggccgccgtgctcttcaccttcttctgggtcgag
ggcttcttcgcggccaacgccgccaacgtgacgccgctgtttcgctggctgccgatcctc
atgatcttcctggtcgcggcgctgaccatgcggctgtggagcgaggagcacaagaccggc
accatcgagatcctgctgaccttgccggtgccggtgcacaagctggtgctcggcaagttc
acggccgggctggcgctggtcgccgtcgccctgatgctcaccctgggtctgccgatcacg
gtgtcgatgatgggcaacctcgactggggcccggtcgtcggcggctacctgggcgcgctg
ctgctggccggcgcgtatctggccatcggcctgtgcatctcgtcgaccaccgagaatcag
gtggtcgccctgatcggcacgctgctcgtcggggcgctgttctacgtgcccggcgtcgag
gccgtggccgatctcttcggcgtcgccggcggcgagctgctgcgccgtatcggcaccggc
agccgcttcgagagcgtggcccggggtgtgctcgatctgcgcgatctggcctactacgcg
gcgctgatcgtcatcttcttgacgctcaacaccgtgctcttgcaggcgcggcgctggagc
aagagcgagcgcacggccgcgcggcgtcacgccacccagctcaccgtggtgttgctcatc
ggcaacgcgctggcgctcaatctgtggctggcgccggtgaccgcggcgcgcgtcgacctc
accgaggatgcgatgtacagcctctcggagccgagcgagacgctgctcaactcgctcgac
gagccgctgctcatccgcggctacttctccaaccgcacccacccgatgctgttgccgctg
gtgccccagattcgcaacatgctgtccgaatacgaaatcgccggcggcgacaaggtgcgc
gtcgagctgctcgaccccagcgaggacgaggacgccgagaccgaggcgcgcgagaagtac
aacatccagccggtgcccatgcagttcgccgggcgccacgagcagtcgctggtcaacgcc
tacttccacgtgctcatcgtctacggcgaccagcaccgcgtgctcgaggtcgagcagctc
gtgcagttcgatctcgtcgacctgggcaactatcgcgcctacgtcgacaacctcgagtac
gagctgaccaagaccatccgcgagatcgtcttcgggtttcagaccatcgagtcgatgttc
gccagcatgccggagcagatccagctcaccgcctacctcacgcccgagggcctgcccgcg
gtgtgggccgaggcgccgccgctcatcgacgcgatcgcggccgacctggagacggcatcg
ggcggcaagttccgctaccagcgggtcacgccgagcaccgaggaggagcgcgcacaggcg
cagcagcgccacggcgtgcggccggtgccggcgtcgctgctgggcaaagacaacgtctac
tttcagctcctgctcgagatgggcgaccgcctcgagcccgtgcgcgtgcccgagcagatc
accgaaggcgcgctgcgcgcggccattcgcggcgcggtcgagcgcatggtgccgggcttc
acccgcgtggtcggcctggtgacccccgatcccatcgtcgagtcgcccgacatggccggc
caggagctgccgccgccgcgtccggtgcagaacttccgcgccctggcgcaggtgctggcc
gagacctatcgcgtgcgcaacgtcagcctcggtcgcggcaccgtgcccgacgacgtcgag
gtgctgctcgtcgccggtcccgacgacctcgacgagaccgagcaggaggccatcgatcag
ttcctgatgcgcggcggcgcggtcatcctgctggtggcgccctatcgcctcgacctgagc
acggcggggcgcggcgcggtcgcgctgcaggaggtcgaccccggcctggacgcgctgctg
cgccactacggcgtggtcgtcgacaagctgctggtgctcgacgagcagaacgacgatatc
ccgctgccgggcaagcgcggcgcgggcgaccagcgcagcggcctgcgccagagttatccg
ttttttgtccgcgtggacgaagacggcatggccgaggacagcatcgtcaccggcggcctg
tcctcggtcatcgtccactgggcctcgccggtgcaggtgctggccgacgccgagggcgcc
gatgcgcgcgaggtcgaggtgctcttgcagacctcggacgacgcctggctgcaggccgaa
agcgatatcctgcccgacttcgagcgcttccccgagctcggcttcggccgccccgacacg
ccggtgcagagcacggccaaggggccgccctacgcgctggccgtggctatcaccggcagc
ttcgacagcgccgtggccgagcagcgccagggcggcaccgtcatggactatctgatcgaa
cgatcgtccgaggacgcgcgcctggtcgtggtcggcagctcggccttcgtgtccgatgag
gtgctggcgatctcgaccagcgccggctcgcgcgacgtcaccaacaacgtcgccttcgtg
cagaacttgctcgactgggcggtcgaagacaccgagctgctgtcgatccgcacccgcggc
agcgcggcgcgcacgctgagccaggtgggcgaagacgagcgcgcccgctgggagctggcc
aactacatcatcgcgctgctgggcctcggcctggtggtcgtgatcgcgcggctgcgccgc
cgggcgcgcatgcgcgccaccgaacgcatggtcggcgacccggacaagtacgatgccgcg
gacgcggacgccgacgccgacgccgacaacgcggcggatgcggaagccgcgggcgacggg
ggcgacgcagcgaaggcgaagcccgcagcccgggccgacgaggaggacaaggcgtga
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