Haliangium ochraceum: Hoch_5653
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Entry
Hoch_5653 CDS
T01103
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hoh
Haliangium ochraceum
Pathway
hoh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Hoch_5653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoh03400
]
Hoch_5653
Enzymes [BR:
hoh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Hoch_5653
DNA repair and recombination proteins [BR:
hoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Hoch_5653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ACY18130
UniProt:
D0LGA5
LinkDB
All DBs
Position
7757569..7758351
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AA seq
260 aa
AA seq
DB search
MKIATWNINGMRARLDFVLHWLRARQPDIVGLQELKLTEDQFPYDALSELGYHAVVVGQK
AWNGVAVLSREPAELVHAGLPGQDELGARLVCVRVADMAFTTAYCPNGKSTSHPDFLRKL
GWFDALIGQLGTLSEVAGASAGAVLCGDFNLCPTPLDSYNEDLLRGSIFHTDAERERYQR
ILDHGFVDLFRAAHPEERAFSWWDYRGGAFHKRQGLRIDFVLGTADIAARTERVEIDRTY
RKKHDGLTASDHAPVIAELR
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccacctggaacatcaacggcatgcgcgcgcgcctcgacttcgtcctgcac
tggctgcgcgcccggcaacccgacatcgtcgggctgcaagaactcaagctcaccgaagac
cagtttccctacgacgcgctgtccgaactcggctaccacgccgtggtcgtcggacaaaaa
gcctggaacggcgtggccgtgctcagccgcgagccggccgaactggtccacgccggtctg
cccggacaggacgagctgggcgcgcgcctggtatgcgtacgcgtggccgacatggccttc
accaccgcctactgccccaacggcaagagcaccagccaccccgacttcctgcgcaagctg
ggctggttcgacgcgctcatcggccagctcggcacgctcagcgaggtcgccggggccagc
gcgggcgcggtgctgtgcggcgatttcaacctgtgcccgacgccgctcgacagctacaac
gaggacctcttgcgcggcagcatcttccacaccgacgccgaacgcgaacgctatcagcgc
atcctcgatcacggcttcgtcgacctgttccgggccgcgcaccccgaagagcgagccttc
tcctggtgggactaccgcggcggcgcgttccacaagcgccagggcctgcgcatcgacttc
gtgctcggcaccgccgacatcgccgcccgcaccgagcgggtcgaaatcgaccgaacgtac
cgaaaaaagcacgacggcctcaccgcatccgaccacgccccggtcatcgccgagctgcgc
tga
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integrated database retrieval system
