KEGG   Haliangium ochraceum: Hoch_6423
Entry
Hoch_6423         CDS       T01103                                 
Name
(GenBank) exodeoxyribonuclease III Xth
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
hoh  Haliangium ochraceum
Pathway
hoh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hoh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Hoch_6423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hoh03400]
    Hoch_6423
Enzymes [BR:hoh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     Hoch_6423
DNA repair and recombination proteins [BR:hoh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Hoch_6423
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: ACY18892
UniProt: D0LQ83
LinkDB
Position
complement(8808509..8809414)
AA seq 301 aa
MLARVRVVSWNVNGLRAVDRTTPRRASAAASPSPGQVRASTGARAQRGGGRFRRWIERVD
ATIVGVQEVRARRDALPRRLLQPRGWHAHLVEAERAGYSGVGLYAKLAPDGADTALAGGD
FDREGRLQIAHFGRLSVANVYFPNGNGSNRDNSRVPFKLDFYRALFDALGALRDAGQRVL
VMGDFNTAHRDIDLARPKQNRKTSGFLPEERAELDRWVAAGWVDTFRHFEPGPGHYTWWS
QRAGVRARNIGWRIDYVFACPEAMPFVRSAFLMPQVGGSDHCPHGVVLDPAITRAAPPLP
S
NT seq 906 nt   +upstreamnt  +downstreamnt
atgctcgcgcgcgtgagagtcgtttcgtggaacgtaaacggtctgcgcgccgtcgatcgc
accacgccgcgccgggcctcggccgccgcgtccccgtccccagggcaggtgcgtgcgagc
acgggcgcacgggcgcagcgcggcggcgggcgcttccgccgctggatcgagcgcgtggac
gccaccatcgtcggcgtgcaggaagtgcgcgcgcgtcgcgatgcgctgccgcggcgtctg
ctgcagccgcgcggttggcacgcgcacctggtcgaggccgagcgcgccggctacagcggc
gtgggcctgtacgccaagctggcgcccgacggcgccgacaccgcgctcgcgggcggggat
ttcgaccgtgagggccgattacagatcgcgcacttcggccgcctgagcgtggccaacgtg
tacttccccaacggcaacggcagcaaccgcgacaacagccgggtgcccttcaagctcgac
ttctaccgcgcgctcttcgacgcgcttggcgcgctgcgtgatgccggacagcgtgtcctg
gtgatgggcgatttcaacaccgcgcaccgcgacatcgatctcgcgcgtcccaagcagaac
cgcaagaccagcggatttctgcccgaggagcgcgccgagctcgaccgctgggtcgcggcc
ggctgggtcgatacctttcgccacttcgagcccggacccggtcactacacctggtggagc
cagcgcgccggcgtgcgtgcgcgcaacatcggctggcgcatcgactacgtattcgcgtgc
cccgaggccatgcccttcgtgcgcagcgcgttcctcatgccccaggtcggcggctcggat
cactgcccgcacggggtcgtcctcgatcccgcgatcacgcgcgccgcgccgccgttgccc
tcctga

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