Haliangium ochraceum: Hoch_6483
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Entry
Hoch_6483 CDS
T01103
Name
(GenBank) DNA-directed DNA polymerase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hoh
Haliangium ochraceum
Pathway
hoh03030
DNA replication
hoh03430
Mismatch repair
hoh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hoch_6483
03430 Mismatch repair
Hoch_6483
03440 Homologous recombination
Hoch_6483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoh03032
]
Hoch_6483
03400 DNA repair and recombination proteins [BR:
hoh03400
]
Hoch_6483
Enzymes [BR:
hoh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hoch_6483
DNA replication proteins [BR:
hoh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Hoch_6483
DNA repair and recombination proteins [BR:
hoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Hoch_6483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
AAA_19
APP1_cat
nSTAND3
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
ACY18952
UniProt:
D0LQE3
LinkDB
All DBs
Position
complement(8903267..8904163)
Genome browser
AA seq
298 aa
AA seq
DB search
MAEAREEHGGHLVTLDQIRGQERVVARLRRALEQNRVAHAYLLSGPAGVGKLTTAVALTA
AIECIDAPGQGCGTCSACSKIAAGIHPDVQLLERQGAAQIIPIETIRTQVIPRLAMPPHE
GAARVFLIDEANALPGPSANALLKTLEEPPPRTHFFLCTTAPDLLLPTIRSRCQRVAFAP
LSAELRAELHAGEEVAEKLEGAAQRLLEAVEAQGPAVLYRAAADVAGERVELRAVLELFA
QSLHARARDAAIAQDLGRASLASRRAAAVLKMRRALEQNAHALLSIEALLHELRAIVA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaagcgcgcgaggagcacggcgggcacctggtcacgctcgaccagatccgcggc
caggagcgcgtggtggcgcgtctgcgccgggccctggagcaaaaccgcgtggcccacgcc
tacctgctgagcggcccggccggcgtcggcaagctgaccaccgcggtggcgctcacggcc
gccatcgagtgcatcgacgcgcccggccagggctgcggcacctgctcggcgtgttcgaag
atcgcggccggcatccaccccgacgtgcagttgctcgagcgccagggcgcggcccagatc
atccccatcgagaccatccgcacccaggtgatcccgcgtctggcgatgccgccgcacgag
ggcgcggcgcgcgtgttcctgatcgatgaggccaacgccctgcccggcccctcggccaac
gccctgctcaagaccctcgaggagccgccgccgcgcacgcacttttttctgtgcacgacc
gcgccggacctgctcctgccgaccatccgcagccgctgccagcgggtggcctttgccccg
ctgagcgcggaattgcgcgccgaactgcacgccggcgaggaggtcgccgagaagctcgag
ggcgcggcccagcgcctgctcgaggcggtcgaggcccagggcccggcggtgctgtatcgc
gccgcggccgatgtcgccggcgagcgcgtggagctgcgcgcggtgctcgagctgtttgcc
cagagcctgcacgcgcgtgcccgtgatgcggcgatagcgcaggatctgggacgcgcgtcc
ctggccagtcggcgggccgccgcggttctcaagatgcgccgcgcgctcgaacagaacgcc
cacgctctgctgtccatcgaggccctgctgcacgagcttcgggctatagtcgcgtga
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