Haliangium ochraceum: Hoch_6484
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Entry
Hoch_6484 CDS
T01103
Name
(GenBank) Tetratricopeptide TPR_2 repeat protein
Organism
hoh
Haliangium ochraceum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_19
TPR_2
TPR_14
TPR_1
TPR_11
TPR_8
ANAPC3
TPR_17
TPR_CcmH_CycH
TPR_9
ARM_TT21_N
YfiO
TPR_12
ARM_TT21
FAT
ARM_TT21_C
TPR_4
Motif
Other DBs
NCBI-ProteinID:
ACY18953
UniProt:
D0LQE4
LinkDB
All DBs
Position
complement(8904166..8907939)
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AA seq
1257 aa
AA seq
DB search
MSSTDLIQQARQQFERGSFRDAAATCRRGILSFPEDGEIRLWLGRSLMGLQRYDEVLAEM
QVLLARQPDNAQALALRGEALYYTGELDGAVNALREACRLNPYDAASRALCEQADNARHG
DGEDLIFVDEAPSDVVTRHYDMSQDAEGRFAPSSEGGTAEFFDSLGDGGADAGGAGARGG
AGDSFEEPTAIYDDASSAFGMRLRPRPEAGGAAAGLPGEVDNALTELDEDGGGDFAEMPP
TSMIQLDAPMQGRQRSAPPVPSPRVPAQPLRAEQPTRESEPIRPRAAEQPTRESEPIRPR
ASAPQAQPRSPSSASPGPRLRPDPEPRPAPRPSAVPGSGPTAAPTSMPRSPSSHSPAPVP
RPPSAPAPSAPPPPAGIQLPAPAAAAAPVSYPSLGSDKPSSTPAAYPRSDAAKRASSTGS
RPSASAPRPPSRQSQAAGPASYEPTTAVPRQSMPRRRVWPLALAAVVFLGGGVFGGLELR
KLRLQWEIDQARARAAELMASDAFPGYLGARTVYTEIAHVRAEAEDRALLARTDAALAAE
FGAGYPEALSAVGALGEDGRVDALIARAYLRLAEDDLVGLDARVDDLTVHASEHPFEPYL
RGRERLLAGDAAAAAEAFESAIARTERPLFSVWLGRAQLARGDHAAAEQSFAAVLATVPE
HPAALLGRAEHALAADEEAAAEPLAASLEALIAPPPQPPSADAVTPSPAQRADAARLLVA
LRQRAGDSEGARRAFATLAADSLADEPGALVAVARTRAALGETDAALAELGRGVETWPAR
LDMRIALAEMALASNALAPARKALIDVSDLQERIAGSPAALGLRGRVHLALDDLDSAAED
LEAALALLPGDLAATQALAQVALRRGAPRDAVEFLEPLMSAGASAEIQLAFATALRRSGA
FERAAEVLDTMAKADEPEPRVMLERARLARDQGDWDRARREFIAAAERVPGTPTATEAII
DAARLALDTGERRAARRILERVLGDEADAVEPAVLIEAAHVATASGALADAQGFLDRAAA
GELSGPAQVALARERGHLALRRGTLDSAVEQLALAHAGAPSDGEAALLLIDARLQREELE
QAQAVADALAATAGTSPASQHLAAGLLAMAKREFDTAQERFDQAVAALEEAQATPRQFAR
AHILAGRALFQADELRDASKALERAIRLDPADPEPYFVLGMVEYGRGEYEAAADAFEASL
ERDSESTPKAWFYLGEVELERKKERDAKKAFRAFLERVDDGPEAEQAQRYLREIGGR
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttcgactgacttaatccagcaggcccggcagcagttcgagcgcggttcgtttcgg
gacgccgcggctacctgtcgtcgcggcattctctcctttcccgaggacggcgagatccgt
ttgtggttggggcgctcgctcatgggcctccagcgctacgacgaagtgctcgccgagatg
caggtgctgctcgcgcgccagcccgacaacgcccaggccttggcgctgcgcggcgaggcg
ctgtactacaccggcgagctcgacggcgcggtcaacgcgctgcgcgaggcctgccggctc
aacccctacgacgcggcctcgcgcgcgctgtgcgagcaggccgacaacgcgcgccacggc
gacggcgaagatctgatcttcgtcgacgaggccccgagcgacgtggtcacccgccactac
gatatgtcgcaggacgccgagggccgctttgcgccttcgtccgagggcggcacggccgag
ttcttcgacagcctgggcgatggcggcgcggacgcgggtggcgcaggcgcccgcggcggc
gccggtgactccttcgaagagccgaccgcgatctacgacgacgccagcagcgcctttggc
atgcgcctgcggccgcggcccgaggctggcggcgcggcggccgggctgcccggcgaggtc
gacaacgcgctcaccgagctcgacgaggacggcggcggcgacttcgccgagatgccgccg
acctcgatgattcaactcgacgcgccgatgcagggacggcagagatctgcgccgccggtg
ccgagcccgcgcgtccccgcgcagccgctgagggccgagcagccgacccgcgaatccgag
cccatccggccgcgcgcggccgagcagccgacccgcgaatccgagcccatccggccgcgc
gcctccgctccgcaagcgcagccgcgctcgccgtcctcggccagtccggggccgcgactg
cggccagacccggaaccgcggccggcgccgcggccgagcgcggtacccgggtcggggccg
acggctgctccgacatcgatgcccaggtcgccctcgtcgcacagtccggcgccggtgccg
cgcccgccgtccgcgcctgcgccgagcgcgccgccgccgccggccgggatacagttgccc
gcgcccgcagccgcagccgcgcccgtgtcgtatccctcgctcggcagcgacaagccgtcg
tccacgcccgcggcctatccgcgcagcgacgcggccaagcgcgcctcctccacgggctcg
cggccgtccgccagcgcccctcgtccgccctcgcggcagtcccaggccgccggcccggcg
agctacgagccgaccacggcggtgccccggcagtcgatgccgcggcgccgcgtgtggccg
ctggcgctcgcggccgtggtgtttctgggcggcggcgttttcggcgggctggagctgcgc
aagctgcgcctgcagtgggaaatcgaccaggcacgcgcgcgcgcggccgagctgatggcc
agcgacgccttccccggctacctgggcgcgcgcaccgtctacaccgagatcgcgcacgtg
cgcgccgaagccgaggaccgggcgctgttggcgcgtaccgacgccgcgctggcggccgaa
ttcggcgccggctaccccgaggcgctgagcgcggtcggcgcgctgggcgaggacggccgg
gtcgatgcgctgatcgcgcgcgcctatctgcgcctggccgaagacgacctcgtcggcctc
gacgcgcgggttgacgatttgaccgtccacgcgtccgagcatccgtttgagccctacctg
cgcggccgcgagcgcttgctggcgggtgacgccgcagccgcggccgaggcctttgagagc
gcgatcgcgcgcaccgagcggccgctgttctcggtgtggctgggtcgcgcgcagctcgcg
cgcggtgatcacgccgccgccgagcagagcttcgccgcggtgctggccaccgtgcccgag
cacccggccgcgctgctgggccgcgccgagcacgcgctggccgcggatgaggaggccgcg
gccgagcctctggcggcctcgctcgaggcgctgatcgcgccgccgccgcagccgcccagc
gccgacgccgtgacgccctcgccggcgcagcgcgccgacgccgcccggctgctggtcgcg
ttgcgacagcgcgctggcgacagcgagggcgcccggcgcgcgttcgccaccctggcggcc
gacagcctggccgatgagcccggcgcgctggtggccgtggcccgcacgcgggcggctctg
ggcgagaccgacgcggcgctggccgagctcggccgcggcgtcgagacctggccggcgcgc
ctcgacatgcgcatcgcgctggccgagatggcgctggcaagcaacgcgctcgcacccgcg
cgcaaagccctgatcgacgtctccgacctgcaggagcgcatcgccggcagcccggcggcg
ctggggctgcgcggccgcgtgcacctggccctcgacgatctcgactccgcagccgaggac
ctcgaggccgcgctggccctgctcccgggcgacctggccgcgacccaggcgctggcccag
gttgccctgcgccgcggcgcgccccgggacgcggtcgagttcctcgagccgctgatgagc
gcgggcgccagcgccgagatccagctcgcgttcgccaccgccctgcgccgcagcggcgcg
ttcgagcgcgccgccgaggtgctcgacaccatggccaaggccgacgaacccgagccccgg
gtgatgctcgagcgcgcccggctggcgcgcgaccagggcgactgggaccgcgcccggcgc
gagttcatcgccgcggccgagcgcgtgcccggcaccccgacggccaccgaggccatcatc
gacgccgcccgcctggcgctcgacaccggcgagcgccgagccgcgcggcggattctcgag
cgcgtgctcggcgacgaggccgacgcggtcgagcccgccgtgctcatcgaggccgcgcac
gtggccaccgccagcggcgcgctcgccgatgcccagggcttcctcgaccgggccgcggcc
ggggagctgagcggaccggcgcaggtggcgctggcgcgcgagcgcggccatctggcgctg
cgccggggcacgctcgacagcgcggtcgagcagctcgcgctggcccacgcaggcgcgccc
agcgacggtgaagccgcgctcttgctcatcgacgctcgcctgcagcgcgaggagctggag
caggcccaggccgtggccgatgcgttggcggccacggccggcacgtcaccggccagccag
cacctggccgcgggcttgctcgccatggccaagcgcgaattcgacaccgcccaggagcgc
ttcgaccaggccgtggccgcgctcgaagaggctcaggccacgccgcggcagttcgcgcgg
gcccacatcctggccggccgcgccctgttccaggccgacgagctgcgcgacgcgagcaag
gccctcgagcgcgccattcgcctcgatcccgccgatcccgagccctacttcgtgctcggc
atggtcgagtacggacgcggcgagtacgaggccgccgccgacgccttcgaggcctcactc
gagcgcgacagcgagtccacgcccaaggcctggttttacctcggcgaggtagagctcgag
cgcaagaaagagcgcgacgccaagaaggcgttccgggcctttctcgagcgcgtggacgac
ggaccggaggccgagcaggcccagcgctacctgcgcgagatcggcgggcgctga
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