Haliangium ochraceum: Hoch_6613
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Entry
Hoch_6613 CDS
T01103
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hoh03012
]
Hoch_6613
Translation factors [BR:
hoh03012
]
Eukaryotic type
Elongation factors
Hoch_6613
Prokaryotic type
Hoch_6613
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
WHD_2nd_SelB
WHD_3rd_SelB
GTP_EFTU_D2
Beta-barrel_SelB
PaaX
MMR_HSR1
DUF8462
MarR_2
GTP_EFTU_D4
AbiEi_4
RsgA_GTPase
EIF_2_alpha
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ACY19079
UniProt:
D0LRT7
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All DBs
Position
9067193..9069139
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AA seq
648 aa
AA seq
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MTAPPRRSLILGTAGHIDHGKTALVKALTGVDTDRLSAEKERGITIELGFAHLALGPLSC
GVVDVPGHERFIKSMVAGAGGIDVVCLVIAADEGIMPQTREHLDVCELLGVRRGVVALTK
SDLVDVEWQELMREEVREGLAASFLREAAIVPVSARTGAGLDALRQALQQQAEAVVERPA
GGVFRLPLDRVFTMRGFGTVVTGSALGGVVRVGENLVVHPRGTEAKVRGIQVHGEARDSA
EAGMRCALNLSGVAREELRRGDILALPDAVAPSHILDTRFRYLASNKSALPRRSQVLVHH
GTAQLMGTLVLVDAESLAPGEEGLVQVRIDAREALAALPGDRFIARGFVPLEHYGTTIGG
GEIVRVQAPKVRRATRAEGADTLRRMAEASLAQRIALEVRAAAHASPDSGELGRRLGLEA
AALAAALERLVQTGELVAAGEGEERVYCHAEIFAAMEQQALGHLRAFHEANPGREGMSRQ
ELRTRLPAALPGRMYELVLNALVQRGAIAAEADLVRRIQGRAQAAGAMLTPIERDIVEAF
RGWGLTPKRPKEVPEALGLDVNAVRPALERLLQRGLLVRVRSDLYVDAAAIAELRQRLEA
YLDAEGEIAAPAWKTITGTSRKYAIPLAEYFDAQKLTLRIGDIRKRRG
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
gtgactgccccgccccgacgctcgctcatcctcggcaccgccgggcacatcgaccacggc
aagaccgccctggtcaaagccctcaccggcgtggataccgaccgcctgtccgccgaaaaa
gagcgcggcatcaccatcgagctcggcttcgcccacctggccctggggccgctgtcgtgc
ggcgtggtcgacgtccccggccacgagcgcttcatcaaatccatggtcgccggcgccggc
ggtatcgacgtggtctgcctggtcatcgccgccgacgagggcatcatgccgcagacccgc
gagcacctcgacgtgtgcgagctgctgggcgtgcgccgcggcgtggtcgcgctgaccaag
tccgacctggtcgacgtcgagtggcaggagctgatgcgcgaggaagtgcgcgagggcctg
gccgcgagctttctgcgcgaggccgcgatcgtgccggtgtcggcgcgcacgggcgccggc
ctcgatgccctgcgccaggccttgcagcagcaggccgaagccgtggtcgaacgccccgcc
ggcggcgtcttccgcctgccgctcgaccgcgtcttcaccatgcgcggctttggcaccgtg
gtcaccggcagcgcgctcggcggtgtcgtacgcgtgggcgaaaacctcgtcgtccacccg
cgcggcaccgaggccaaggtgcgcggcatccaggtccacggcgaggcccgcgacagcgcc
gaggccggcatgcgctgcgcgctcaatctctccggcgtggcgcgcgaggagctgcgccgc
ggcgacatcctggcgctgccggacgcggtcgcgccctcgcacatcctcgacacccgcttc
cgctacctggccagcaacaagtccgcgctgccgcggcgctcgcaggtgctcgtgcaccac
ggcaccgcccagctcatgggcacgctggtgctggtcgacgccgagtcgctggcgcccggc
gaagagggcctggtgcaggtgcgcatcgacgcccgcgaggccctggccgcgctgccgggc
gatcgcttcatcgcgcgcggattcgtgcccctcgagcactacggcaccaccatcggcggc
ggcgagatcgtgcgcgtgcaggcgcccaaggtgcgccgcgccacgcgcgccgagggcgcc
gacaccctgcgccgcatggccgaggcctcgctcgcgcagcgcatcgcgctcgaggtccgc
gcggccgcgcacgccagcccggacagcggcgagctcggccgccgcctgggactcgaggcc
gccgcgctcgccgccgccctcgaacgcctggtgcagaccggcgagctggtcgccgccggc
gagggcgaggagcgcgtgtactgtcacgccgagatcttcgccgccatggagcagcaggcg
ctcggccacctgcgcgcgtttcacgaggccaacccggggcgcgagggcatgagccggcaa
gagctgcgcacgcgcttgcccgcggcgcttcccggacgcatgtacgaactcgtgctgaac
gcgctggtgcagcgcggcgcgatcgcggccgaggccgacctggtgcgccgcatccagggc
cgggcgcaagcggcgggcgcgatgctcacgcccatcgagcgcgacatcgtcgaggccttt
cgcggctgggggctcacgcccaagcggcccaaggaggtgcccgaggcgctcggcctcgat
gtcaacgccgtgcgcccggcgctcgagcgcctgctgcagcgcgggctgctggtgcgcgtg
cgctcggatctctacgtcgacgccgcggccatcgccgagctgcgccagcggctcgaggcc
tatctcgacgccgagggcgaaatcgcggcgccggcgtggaagaccatcaccgggacctcg
cgcaaatacgccatcccgctggccgagtacttcgacgcgcagaagctcaccctgcgcatc
ggcgatatccgcaaacgccgcggctga
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