Haliangium ochraceum: Hoch_6707
Help
Entry
Hoch_6707 CDS
T01103
Name
(GenBank) Cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
hoh
Haliangium ochraceum
Pathway
hoh00260
Glycine, serine and threonine metabolism
hoh00270
Cysteine and methionine metabolism
hoh00450
Selenocompound metabolism
hoh00670
One carbon pool by folate
hoh01100
Metabolic pathways
hoh01110
Biosynthesis of secondary metabolites
hoh01230
Biosynthesis of amino acids
Module
hoh_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Hoch_6707
00270 Cysteine and methionine metabolism
Hoch_6707
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Hoch_6707
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Hoch_6707
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hoh04147
]
Hoch_6707
Enzymes [BR:
hoh01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
Hoch_6707
Exosome [BR:
hoh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Hoch_6707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Met_gamma_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ACY19171
UniProt:
D0LT35
LinkDB
All DBs
Position
9203470..9204642
Genome browser
AA seq
390 aa
AA seq
DB search
MGSRPPSHGFGTRAIHAGQSPDPSTGAIMTPVYMTSTYVQSTPGEHKGFEYSRTQNPTRS
ALEANLAALEGARHGLAFASGLAATSTALQLLSAGDHVVACDDLYGGTYRLFDKVYRRFG
LSFDYVDPSAGPSAVEAALTDATRMVWLETPTNPMLKLCDIAAVAELCKRRGLLLAVDNT
FLTPFNQNPLALGADLVCHSTTKYLNGHSDTVGGALITDNDELHEKLAFLQNAVGAVPSP
MDSFLVMRGLKTLHVRMERHERNARALAEWLVGHEQVERVIYPGLESHPQHELAKRQQRG
FGGMISFDLRGGEPAARRFLETCELFSLAESLGGVESLVEHPAIMTHASVPAERRRALGI
GDGFIRLSVGIEELDDLRGDLERAFFAARS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgggctctcgtccgccttcccacggctttggcacccgcgccatccacgccggccaatcc
cctgaccccagcaccggcgcgatcatgacgccggtctacatgacctccacctacgtgcag
agcacgccgggggaacacaagggcttcgagtactcgcgcacgcagaacccgacccgttcg
gcgctcgaggccaacctcgccgcgctcgagggcgcgcgccacgggctggccttcgcctcc
ggtctggccgcgacctcgaccgcgctgcagctcctgtcggcgggcgatcacgtggtcgcc
tgcgatgacctctacggcggcacctatcgcctcttcgacaaggtgtatcgccgcttcggg
ctgtccttcgactacgtggatcccagcgcgggtcccagcgccgtcgaggccgcgctcacc
gacgcgacccgcatggtgtggctggagacgccgaccaacccgatgctcaagctgtgcgac
atcgcggccgtggccgagctgtgcaagcggcgcgggctgctgctggcggtcgacaacact
ttcctcacgcccttcaaccagaacccgctggccctgggcgcggacctggtctgtcactcg
acgaccaagtacctcaacggccactccgacaccgtcggcggcgcgctcatcaccgataac
gacgagctgcacgagaagctcgcgttcctgcagaacgcggtcggcgcggtgccctcgccc
atggactcgttcctggtcatgcgcgggctcaagaccctgcacgtgcgcatggagcggcac
gagcgcaacgcgcgcgcgctggccgagtggctcgtgggacacgagcaggtcgagcgcgtc
atctaccccggcctcgagagtcacccgcagcacgagctggccaagcgccaacagcgcggc
ttcggcggcatgatcagcttcgatctgcgcggcggcgagccggctgcgcggcgcttcctc
gagacctgcgagctgttctcgctggctgagtcgctcggcggtgtcgagtcattggtcgag
catccggccattatgacccacgccagcgtgccggccgagcgccgtcgcgcgctcgggatc
ggcgatggcttcatccgcctgagcgtcggcatcgaagagctggacgacctccgtggtgat
ctagaacgcgcttttttcgccgcccgctcctga
DBGET
integrated database retrieval system