Haliangium ochraceum: Hoch_6870
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Entry
Hoch_6870 CDS
T01103
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hoh
Haliangium ochraceum
Pathway
hoh03030
DNA replication
hoh03430
Mismatch repair
hoh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hoch_6870
03430 Mismatch repair
Hoch_6870
03440 Homologous recombination
Hoch_6870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoh03032
]
Hoch_6870
03400 DNA repair and recombination proteins [BR:
hoh03400
]
Hoch_6870
Enzymes [BR:
hoh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hoch_6870
DNA replication proteins [BR:
hoh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Hoch_6870
DNA repair and recombination proteins [BR:
hoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Hoch_6870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_30
AAA_14
AAA_16
Rad17
AAA_2
PIF1
Mg_chelatase
AAA_18
AAA_19
TIP49
AAA_33
TsaE
nSTAND3
RNA_helicase
DUF6665
Motif
Other DBs
NCBI-ProteinID:
ACY19334
UniProt:
D0LUL1
LinkDB
All DBs
Position
complement(9404860..9406809)
Genome browser
AA seq
649 aa
AA seq
DB search
MSYVVLARKYRPNTFSEVVGQEHVTRTLANAFAKDRVHHAFLFCGPRGVGKTTAARILGK
ALNCERGPTAEPCGSCVACETITNGTAVDYFEMDGASNRGIDAIRELTEAVRYQPAVLRK
KVYVIDEVHMLTTEAFNALLKTLEEPPPHVSFVLATTEPHKVPNTILSRCQRYDFKLVPA
PKLIEHLRRIFAAEEIEVDSGAISLIVRESGGSVRDSLSLCDQVISYVGTSNIGESDVAE
VLGVADRSLTRTLVSALAEGDAKSALEAVEAADARGVDEVQLARAIVRYLRDLAVMQVAP
EAEGLIDGSEEEAAELREHAGRLSRERVTQMFDRMVQACNDLADTQMPRLVLDLALIDVA
ALEPVLPLGDLIDRLGALERRLGGGGGRGGPGGGGRGGPSRSPASAASPGGQRGNARNPG
AARMSAGDLDPELVPPPPPGVAVAPQQQQPPSQPPPPSRPQQPPARAQATPPPPPAEDFD
RPPPAEPPAAPPAGRASAPAAAAAPNAGESDMMAAWEQMLPALGETHRSLAGFYEHAKIL
SAAANRIEAGFAPEMSALAELAMEPESMAAMRSFLHGYFGRPVDLAVRVLSAAEAEKNQS
PARSVFDLNRERAEEDKRQRELEARAHPIYKKVLSTFGRPAREEIRTDV
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctacgtggtcctggcgagaaagtaccggcccaatacattctccgaggtcgtcggc
caggagcacgtcacccgcactctcgccaatgcctttgccaaggaccgcgtgcaccacgcg
tttctgttctgcgggccgcgcggcgtgggcaagaccacggccgcccgcatcctgggcaag
gcgctcaactgcgagcgcggacccacggccgagccctgcggcagctgcgtggcctgcgag
accatcaccaacggcaccgcggtcgactacttcgagatggacggcgcctcgaaccgcggc
atcgacgcgatccgcgagttgaccgaggcggtgcgctatcagcccgcggtgctgcgcaag
aaagtgtacgtcatcgatgaggtgcacatgctcacgaccgaggccttcaacgccttgctc
aagacgctcgaagagccgccgccgcatgtgagcttcgtcctcgccaccaccgagccgcac
aaggtcccgaacacgatcctgtcgcgctgccagcgctacgacttcaagctggtgccggcg
cccaagctcatcgagcatctgcggcgcatcttcgcggccgaggagatcgaggtcgactcc
ggggccatcagcctcatcgtgcgcgagtcgggcggctcggtgcgcgactcgctgtcgctc
tgcgaccaggtcatttcgtacgtcggtaccagcaacatcggcgagtccgatgtcgccgag
gtgctcggcgtcgccgaccgcagcctgacccgcacgctggtgagcgcgctcgccgagggc
gacgccaagagcgcgctcgaggcggtggaggcggccgacgcgcgcggcgtggacgaggtc
cagttggcgcgcgcgatcgtgcgctatctgcgcgatctcgccgtgatgcaggtggcgccc
gaggccgaggggctcatcgacggctccgaggaggaggccgccgagctgcgcgagcacgcc
gggcggctgtcgcgcgagcgcgtcacgcagatgttcgatcgcatggtgcaggcgtgcaac
gacctcgccgacacgcagatgccgcgcctggttctggacctggcactcatcgacgtggcc
gcgctcgagccggtgctgccgctgggcgatctgatcgatcgtctgggcgcgctcgagcgc
cggctcggcggggggggaggtcgcggcgggccgggcggcggtggtcgcggtggtccctcg
cgctcgccggcctcggcagcgagtcccggcggccagcgcggcaacgcgcgcaatcccggc
gccgcgcgcatgagcgcgggcgatctcgatcccgagctggtgccgccgccgccgccggga
gtggccgtagcgccgcagcagcaacagccgccttcgcagccgccgccgccctcgcgaccg
cagcagccgccagcgcgcgcgcaggcgacgccaccgccgccgccggcggaagacttcgat
cgtccgccgccggccgagccaccggctgcaccaccggccgggcgcgcgtcggccccggct
gccgcggctgcgcccaacgctggcgagagcgacatgatggccgcgtgggagcagatgctg
ccggcgctgggagagacccaccgctcgctggccggcttctacgagcacgccaagatcctg
tcggccgcggccaatcgcatcgaggccggcttcgcgccggagatgagcgcgctggccgag
ctggccatggagcccgagtccatggccgcgatgagatcgtttctgcacggctattttggc
cgcccggtcgatctcgcggtgcgggtattgtcggcggccgaggccgagaagaatcagtcg
ccggcgcgttcggtgttcgacctcaaccgcgagcgcgccgaagaggacaaacgtcagcgc
gagctcgaggcccgcgcccatccgatctacaagaaagtcctgtccaccttcgggcggccc
gcccgagaggagatccgaaccgatgtctga
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