Haliangium ochraceum: Hoch_6895
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Entry
Hoch_6895 CDS
T01103
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hoh03016
]
Hoch_6895
Transfer RNA biogenesis [BR:
hoh03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Hoch_6895
Prokaryotic type
Methyltransferases
Hoch_6895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
AIG1
Dynamin_N
GCV_T
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ACY19358
UniProt:
D0LVP0
LinkDB
All DBs
Position
complement(9440816..9442240)
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AA seq
474 aa
AA seq
DB search
MLSAQRDTIAAIATPTGTGGVGVVRISGPQAGAVLGRVLARAPDDLPDRALVYGLARDRD
GGRLDDVLAVLMRAPRSFTGEDVAEIHGHGGPVNMSRLLRAVLEQGARPAEPGEFTRRAF
ENGKLDLVRAEAILDVIEAGSERAWRLAQAQLAGDFGQQVTALRARATSLLAEVEACIDF
PEEGEDYLATSEVAARCRTLGRELSGFAGTFALGRALRSGIEVALVGPVNAGKSSIFNAL
IGSERAIVDAAPGTTRDYVEARAVWDGVPVTVIDTAGERDVAGSQAGERIEARGIEMGRA
RAAQADLRVHLRSATGAGGAQGEGGGDGADRAHGAAGTQDDAGAWSAASADERELQVWSK
CDLGAPADGDPRPRTSARTGAGLDALKQLILERVCGASLEADEGHVVTSERQRDLLAHAA
AAFERAAQARDARAPIEVLALEIREATEQLARLMGERVGEEVLDDLFGRFCIGK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgctctccgcacagcgcgacaccatcgccgccatcgccaccccgaccggcaccgggggc
gtgggcgtcgtgcgcatcagcggcccgcaggcgggagccgtgctcggccgtgtgctcgcg
cgcgcgcccgacgacttgccggaccgcgcgctggtctacggcctggcccgcgaccgcgac
ggcggccggctcgacgacgtgctcgccgtgctcatgcgcgcgccgcgctcgttcacgggc
gaggacgtcgccgagatccacggccacggcggcccggtgaacatgtcgcggctcttgcgc
gcggtgctcgagcagggcgcgcgtcccgccgagccgggcgagttcacgcgccgcgccttc
gaaaacggcaagctcgacctggtccgcgccgaggccatcctcgacgtcatcgaggccggc
agcgagcgcgcctggcgcctggcccaggcccagctcgccggcgacttcggccagcaggtc
accgcgctgcgcgcgcgcgccacctcgctgctcgccgaggtcgaggcgtgcatcgacttt
cccgaggagggcgaggactacctggccaccagcgaggtcgccgcgcgttgtcggacactt
ggacgagaactgtccggattcgccggtaccttcgccctgggccgcgctctgcgcagcggc
atcgaggtcgccctcgtgggccccgtgaacgccggaaagtcgagtattttcaacgccttg
ataggttctgagcgagccatcgtggacgccgcacccggcaccacgcgcgactacgtcgag
gcccgcgcggtgtgggacggcgtgcccgtgaccgtcatcgacaccgccggcgagcgtgac
gttgccggcagccaggccggcgagcgcatcgaagcccgcggcatcgagatgggacgggcg
cgcgcggcgcaggccgatctgcgcgtgcatctgcgcagcgcgacgggagccggtggcgca
caaggcgagggcggtggggacggcgctgaccgggcacacggcgcagccgggacacaggac
gacgccggcgcgtggtcggcggcgagcgcggacgagcgcgagctgcaggtgtggagcaag
tgcgacctgggcgcgcccgcggacggcgacccgcggccgcggacctcggccaggaccggc
gccgggctcgacgcgctcaagcagctcatcctcgagcgcgtatgcggcgcgtcgctcgag
gccgacgagggccacgtggtcaccagcgagcgccagcgcgacctgctcgcgcacgcggcc
gcggccttcgagcgcgcggcccaggcccgcgacgcgcgcgcgcccatcgaggttctcgcg
ctcgagatccgcgaggccaccgaacaactcgcgcggctcatgggcgagcgcgttggcgag
gaggtcctcgacgacctcttcggccgcttttgcataggcaagtaa
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