KEGG   Vreelandella olivaria: HORIV_05660
Entry
HORIV_05660       CDS       T06227                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
hol  Vreelandella olivaria
Pathway
hol02020  Two-component system
Brite
KEGG Orthology (KO) [BR:hol00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HORIV_05660
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:hol02022]
    HORIV_05660
Two-component system [BR:hol02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   HORIV_05660
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_16 AAA AAA_2 bpMoxR AAA_7 DUF6716 Torsin AAA_22 DUF815 HTH_17 YdaT_toxin TIP49
Other DBs
NCBI-ProteinID: BBI48145
LinkDB
Position
complement(399230..400612)
AA seq 460 aa
MHEPSTLPVMVIDDEPHLRITASQTLELAGYTPYCFESAEQALAALTPDFPGVIVSDIRM
PGMDGMALLHELHSRDATLPIILITGHGDISTAVEAMRAGAWDFLEKPFAGDQLLDVVRR
GIEKRQLSLENQRLKAELEVQQAALGPRLVGRTAVISRLAAMIQRISQVEADVLLFGETG
TGKDLVARAIHERSGRRNSPFMAINCGAVPENTIESELFGHEKGAFTGAVERRIGKFEHA
NGGTVFLDEIESMPMALQVKLLRVLQERSVERLGANETVPLDIRVIAATKVDLKAASEEG
HFREDLYYRLNVVTLPLPALRERREDIPLLFQHFAVVAANRSGLEAPTLDSHAIAALLAH
DWPGNVRELRNLAERYVLLGAAFDYRLDALLEGVNADTEEPTLPRQVELFEKSLISQSLS
RYHGRVTDVCRHLGIPRKTFYDKLKKHGLNADDYRHSSEP
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgcatgagccgtcgacgctgccggtcatggtgatcgacgacgaaccgcacctgcggatc
accgccagccaaacccttgaactcgcgggctacacgccctactgctttgaatcagcagaa
caagcgctggcggcattgacacctgacttcccaggggtaatcgtcagcgacatccgcatg
ccgggtatggatggcatggcactgctccatgagttacatagccgcgacgccactctgccg
atcatcttaatcaccggccacggcgacatttccacggccgtagaagccatgcgtgctggg
gcctgggattttcttgagaagccgtttgccggtgatcaactgctggatgtggtgcgccga
ggcatagagaagcgccagctcagtttggaaaaccaacgtcttaaagccgagctggaggtg
cagcaagcagcgcttggcccgcgcttagttggccgcacagcggtcatttcgcggctggcc
gccatgattcagcgcatcagccaagtcgaagccgatgtactactgtttggtgagacggga
accggaaaagacctggtggcccgtgcgattcacgagcgcagcgggcgccgtaacagcccc
tttatggcgattaactgcggcgcagtgcctgaaaacaccattgaatcggagctgtttggg
catgagaaaggcgccttcaccggtgccgtcgagcggcgcatcggcaagtttgaacacgcc
aacggcggcacggtgtttctggacgagatcgagtcaatgcccatggcactgcaggtcaaa
ttgctgcgggtacttcaagagcgcagcgtcgagcggctgggcgccaatgaaaccgtgccg
ctcgacatccgcgttatcgcggccaccaaggtggatctcaaagccgcctccgaagagggg
catttccgcgaagacctttactaccggctcaacgtagtcaccctgccgctacctgcgctg
cgcgagcggcgtgaggatatccccttgctgttccagcactttgccgtggttgcggccaat
cgcagtgggctggaagcaccgactctcgacagccacgccattgcggctctactagcccat
gactggcccggtaacgtacgcgagctgcgtaaccttgccgagcgctacgtgctgctgggg
gccgcctttgattaccgcctggatgcgctgttggaaggggtcaatgccgacaccgaagag
cctaccctgccacgccaggtagagctgtttgaaaagagtctgatcagccaatcactgtca
cgctaccacggccgggtaaccgacgtttgccgtcacttgggtatcccacgcaaaaccttt
tacgacaaactgaaaaagcacggtctcaatgccgacgactaccgccatagcagtgagccc
tga

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