Vreelandella olivaria: HORIV_05890
Help
Entry
HORIV_05890 CDS
T06227
Name
(GenBank) hypothetical protein
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
hol
Vreelandella olivaria
Pathway
hol02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hol00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HORIV_05890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hol02000
]
HORIV_05890
02044 Secretion system [BR:
hol02044
]
HORIV_05890
Transporters [BR:
hol02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
HORIV_05890
Secretion system [BR:
hol02044
]
Type I secretion system
Multiple protein transporter
HORIV_05890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
ABC_membrane
AAA_21
AAA_16
AAA_29
nSTAND3
Cytidylate_kin
AAA_33
Mg_chelatase
Ost5
Motif
Other DBs
NCBI-ProteinID:
BBI48168
LinkDB
All DBs
Position
complement(423403..424728)
Genome browser
AA seq
441 aa
AA seq
DB search
MLALFHPWFGLFALGAGIILATLAIINEVTTKSLLNDANSQHVMSQDLANSNLRNAEVLH
AMGMLPGIMGRWSARHREYLVLQSKASDRAGLITNTSKVLRLMFQSLILGLGAYLVLGGD
LTPGMMIAGSILMGRALAPIDQMINGWKGFSGARTAKARLGELLTAIPAEEPRMPLPKPK
GRLALDGVTAAPPGQKLATLRDINLTIAKGEHIAIVGPSASGKSTLARVALGIWPSQFGC
VRLDGADITQWNRMALGPHIGYLPQDIELFDGTISENIARFDEVDPQAVVLAAQRAGVHD
MILEQPNGYDTWLSHGGHALSAGQRQRIGLARALYGQPVLIVLDEPDANLDDAGEHSLAH
CLVRLRQEGTTALIITHRSLLLRNVDRVLVLKEGQIASLKPPTRIAPVTRMTADGGRPAP
PQRVTSLKPSARGRHGGEEAQ
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgcgctgttccatccctggtttgggctcttcgccttgggggcaggcatcatcctg
gcgacacttgccatcattaacgaagtcaccaccaaatcgcttctgaacgatgcaaacagt
cagcatgtaatgtcccaggacttagccaacagcaatctgagaaacgcagaggtgctccac
gccatggggatgctgcccggcatcatggggcggtggagtgctcgccatcgcgaatacctg
gttctgcaatccaaagccagcgacagagccgggctgatcaccaacacctccaaggtgcta
aggctgatgttccagtcgttgattcttggcttaggggcttatctggtacttgggggcgac
ctgacgcccggtatgatgattgccggatccattctgatggggcgggcgctggcgcctatc
gatcaaatgattaacggctggaaggggttttctggcgctcgtaccgccaaggcgcgcctc
ggggagctactgacggcgattcctgctgaagagccgcgcatgccacttcccaaacctaag
ggacgtctcgcgcttgatggtgtcacggcagcgccgcccggacagaagttggccaccctg
cgcgatatcaacctaaccatcgccaagggcgagcacatcgccatcgtcgggcccagcgcc
tccggcaagtcgacgcttgcgcgtgtggcgctggggatttggccgagtcagttcggctgt
gttcgcctggatggcgccgatatcactcagtggaaccgcatggcgctggggccccacatc
ggctacctaccccaagatattgaacttttcgatggcacgatctcggagaatattgctcgc
tttgacgaagtcgaccctcaagcagtggtactggcggcgcagagagccggtgtgcatgac
atgattctcgaacagccgaacggctatgacacttggctatcccatggcggtcatgccctc
tccgcaggccagcgccaacgtatcggcttggcgcgggcgctgtatggccaacccgtactg
atagttctggacgagcccgatgccaatctggacgatgcgggtgagcactcccttgctcac
tgtctcgttcggctacgccaggaaggcaccacggcactgatcattactcaccgttcgctc
ctgctgagaaatgttgatcgggtattagtgttgaaagagggccaaatcgcctcgctcaag
ccacccaccagaatagcgccagttactcgcatgaccgcagatggaggtcgccccgcacca
cctcagcgcgtgacgtcgctaaagcccagtgcacgcggtcgccatggcggcgaggaggct
cagtaa
DBGET
integrated database retrieval system
