Vreelandella olivaria: HORIV_07510
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Entry
HORIV_07510 CDS
T06227
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hol
Vreelandella olivaria
Pathway
hol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HORIV_07510 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hol03021
]
HORIV_07510 (rho)
03019 Messenger RNA biogenesis [BR:
hol03019
]
HORIV_07510 (rho)
Transcription machinery [BR:
hol03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HORIV_07510 (rho)
Messenger RNA biogenesis [BR:
hol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HORIV_07510 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA_25
NACHT
AAA
AAA_22
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
BBI48330
UniProt:
A0ABN5WP65
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All DBs
Position
535870..537069
Genome browser
AA seq
399 aa
AA seq
DB search
MGIDNLARSRKQDIIFAILKKHAKSGEDIYGDGVLEILQDGFGFLRSADSSYLAGPDDIY
ISPSQIRRFNLRKGDSISGKIRPPKEGERYFALLKVSQINFDRPENAKHKILFENLTPLF
PDDRMRMEIGNGSTEDLTARIIDLTAPIGKGQRGLLVSPPKAGKTLMLQNIATSITRNNP
ECHLIVLLIDERPEEVTEMSRTVRGEVVASTFDEPPARHVQVAEMVIEKAKRLVEHKKDV
VILLDSITRLARAYNTVVPSSGKVLTGGVDAHALEKPKRFFGAARNIEEGGSLTIIATAL
VDTGSKMDEVIFEEFKGTGNMEAHLDRKLAERRVFPAINIRRSGTRREDLLASEDEMQRM
WILRKLLNPMEDTAATEFLIDRLKDTKTNLEFFEAMKRR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgggtattgataacttggcccgttcgcgcaagcaggacatcattttcgccatcctcaag
aaacacgccaaaagtggcgaggatatctatggcgacggtgtgctggaaattcttcaggat
ggcttcggcttcctgcgtagcgccgacagctcgtatctcgccggtcccgacgatatttac
atatcgccttcgcagatccgccgtttcaatctgcgcaagggtgactccatttccggcaaa
atccgcccgccgaaggagggtgagcgctatttcgccctgctgaaggtcagtcaaatcaac
tttgaccgtccggaaaatgccaagcacaagatcctgtttgagaacttaacgccactgttc
ccagacgatcgtatgcgtatggagatcggtaacggctccacggaagaccttaccgcgcgg
atcatcgatctaaccgcgccaatcggtaaaggccaacgtggtctgctggtatcgccgccc
aaggcgggtaaaacgctgatgttgcagaacatcgcgacctccatcacgcgcaacaaccca
gagtgccatctgatcgtactgctgatcgatgagcgccctgaggaagtgaccgaaatgtcg
cgcaccgtgcgtggcgaagtggtggcgtcgaccttcgatgagccgcctgcgcgtcacgtg
caagtggctgagatggttatcgagaaagccaagcgtttggttgagcacaagaaagacgtg
gtcattctgctcgactcgattactcgcttagcgcgtgcctacaacaccgtggtgccgagc
tccggcaaagtacttaccggtggtgtcgatgcccacgcccttgaaaagccgaaacgcttc
tttggtgcggcgcgtaacattgaagagggcggcagcctgacgattatcgccacggcgttg
gtcgataccggctccaaaatggacgaagtcatcttcgaagagttcaagggtaccggcaac
atggaagcccacctggaccgcaagctggctgagcgtcgcgtattcccggcgatcaatatc
cgtcgcagtggcacccgtcgtgaagacctgctggcctctgaggatgaaatgcagcgcatg
tggattctgcgcaagctactcaatccgatggaagataccgccgccactgaattcctgatt
gaccgtctgaaagataccaagaccaatctcgagttctttgaagcgatgaaacgtcgctaa
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