Vreelandella olivaria: HORIV_23970
Help
Entry
HORIV_23970 CDS
T06227
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
hol
Vreelandella olivaria
Brite
KEGG Orthology (KO) [BR:
hol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hol03000
]
HORIV_23970
Transcription factors [BR:
hol03000
]
Prokaryotic type
Helix-turn-helix
Other families
HORIV_23970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
LacI
TetR_N
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
BBI49976
LinkDB
All DBs
Position
complement(1678590..1679453)
Genome browser
AA seq
287 aa
AA seq
DB search
MSQEIDILSRITTDFAALRDAEKKVAELIFADIEFVTEASISDIAQRAGVSDASVTRFAR
AIGCTNVRDLKTRLTRALAAGRRFIQEATPEDSSSVVYDIATQTLALNRDLLAQADVSGA
VEQLDTARQILVFGAGGGSSILSQELQFRLVRLGYAICAYPQALLPRMVASTLEPDDVVV
VLSVTGYTPEMVESAQIAKQYGAKVIAITAMNSPLAETSDIVLPITSRETDFIYHPSASR
YAMLAVIDVLALELAMRHRERSRTKLRRLKLSLDDHRGGDNRQPLGD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgagccaagaaatcgacattttgtcacgtattaccactgactttgccgcgctgcgcgac
gctgaaaagaaggttgctgagctgatatttgctgacatcgagttcgtcactgaagcgagt
atcagtgacatcgcccagcgcgccggggttagcgatgccagcgtcacccgttttgcccgc
gctatcggctgcacaaatgtgcgtgacttgaaaacgcgcttaacccgcgccttagccgct
ggccgccgttttattcaagaagcaacgcctgaagatagctcaagcgtggtgtatgacatt
gctacgcaaaccctcgcgcttaaccgcgacttactcgcccaagccgatgtgtccggggcg
gttgaacagttagatacagcgcgccagatactggtgtttggcgccggtgggggttccagc
attctctcccaagagcttcagtttcgcctggtacgccttggctatgcgatctgtgcttac
cctcaagcgctgctaccccgcatggtggcgtccacccttgagcctgatgacgtcgtcgtc
gtgctgtcggtgacgggttacaccccggagatggtggagtcagcacagattgcaaagcag
tacggcgccaaggtgattgcgatcaccgcaatgaattctccactcgccgaaacatccgat
attgtgcttccgatcacttcccgggagaccgactttatctaccacccttcggcttcccgc
tacgccatgctggcggtcattgacgtattggcgcttgaacttgccatgcgccatcgcgag
cgctcacggactaaattgcgccgcctcaaactgagcctggatgaccatcgcggtggtgat
aaccgccagccacttggagattag
DBGET
integrated database retrieval system
