Vreelandella olivaria: HORIV_31710
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Entry
HORIV_31710 CDS
T06227
Name
(GenBank) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hol
Vreelandella olivaria
Brite
KEGG Orthology (KO) [BR:
hol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hol03016
]
HORIV_31710
Enzymes [BR:
hol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HORIV_31710
Transfer RNA biogenesis [BR:
hol03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HORIV_31710
Prokaryotic type
HORIV_31710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
WVELL
Motif
Other DBs
NCBI-ProteinID:
BBI50750
UniProt:
A0ABM7GJJ8
LinkDB
All DBs
Position
2183596..2184228
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AA seq
210 aa
AA seq
DB search
MTLFYHFDEKIPLTGRLAMGVEYDGTRYCGFQRLNHAASVQASLEDALSKVANEPIQVSA
SGRTDSGVHATRQIVHFDPPVGRSEKAWIFGANTHLPRDVAVRWVKPVGDDFHSRLCALG
RRYRYVLLNQISRPVLERANVTWCRDPLDADAMHRAAQALVGEHDFSSFRAAGCQSKTPL
AAYALCGREALWPAGDDRHSRQCVLTPHDS
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgttctatcacttcgatgagaaaattccgcttactggccgcctggcaatgggg
gtcgaatacgatggtacccgctactgcggttttcagcgcttaaaccacgccgcgtcggtt
caggcatcgttagaagatgcgttgtccaaggtggccaatgagcccatccaggtgagtgcc
agtgggcgcaccgattcgggtgtgcatgcgacgcgccagatcgtgcattttgacccgccg
gtggggcgctccgaaaaagcctggatcttcggcgctaatacccatttgccccgggatgtc
gccgtgcgttgggtgaagccagtaggcgatgactttcattcacgcctgtgtgccttgggg
cgccgctaccgctacgtgctgctgaatcagataagccgcccggtactggagcgggccaat
gtgacctggtgccgtgaccccttagacgccgatgccatgcaccgagctgctcaggcgctg
gtaggagagcacgatttttccagcttccgtgccgctggctgtcagtccaaaacccccctg
gcggcatatgcactttgtggacgtgaagcgctatggccagctggtgatgatcgacattca
aggcaatgcgttcttacaccacatgattcgtaa
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