Vreelandella olivaria: HORIV_32410
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Entry
HORIV_32410 CDS
T06227
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hol
Vreelandella olivaria
Pathway
hol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HORIV_32410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hol03019
]
HORIV_32410
Messenger RNA biogenesis [BR:
hol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HORIV_32410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Motif
Other DBs
NCBI-ProteinID:
BBI50820
UniProt:
A0ABN5WWR8
LinkDB
All DBs
Position
complement(2225542..2226390)
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AA seq
282 aa
AA seq
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MELPYLCHPLAAGLLRLKFAEHQLSSAAIHVIEPGEALESGPFTLRYLLLTHSIPESCAL
VMMAGGYRVLHTGDWKLDPEPIIGTPINAAHFKALAPIDLVVGDSTNAPMPGHSGSEGDV
ARALAKTLSHCQGRVVVSCFASNLARVLAIGRAAHQCGRRISLMGRSMERMVSVARGLGY
MDDLPPLVPNQDLGYLPPDEVVIIATGSQGEPRAALQRLAQGRHPYVDLQPGDNVMFSAK
AIPGNERPIEQLKSVWRSWASTSMTRSTTLNCTPRGILPRMN
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtggaactgccctatttatgccacccgctggcggctgggctgttgcgcctgaagtttgcg
gaacaccagcttagcagcgcggctattcatgtcattgaacctggcgaggcgctggaaagt
gggcccttcacgctgcgctacttgcttttaacccactcgattcccgaaagctgtgcgctg
gtaatgatggccggcggctatcgcgttttacataccggcgactggaagctcgaccctgag
cctatcatcggcacgccaatcaatgcggcccacttcaaggcgcttgcgccgattgacctg
gtagtgggcgactccactaacgcccccatgcccggccactccggcagcgagggagatgtg
gctcgggcgctggcaaaaacactgagtcactgccagggccgcgtggtggtctcctgcttt
gccagcaatcttgcccgtgtcttagcgataggacgcgcagcccatcaatgtggccgccgc
atcagcttaatgggtcgctcaatggagcgcatggtcagcgttgcacgggggctcggctat
atggatgatttaccgccactggtgcccaatcaagacctggggtatctccccccggatgaa
gtggtgattatcgctaccggcagtcagggtgagccccgcgccgcgctacaacgcctagcc
cagggccgtcatccctatgttgacctgcagccaggcgacaatgtgatgttttcggctaaa
gccattcctggtaatgaacgccccatcgagcagcttaaaagcgtctggcgcagttgggcg
tcaacctctatgacgaggtcaaccaccctgaattgcacgccacggggcatcctgccgagg
atgaactga
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