Vreelandella olivaria: HORIV_43620
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Entry
HORIV_43620 CDS
T06227
Symbol
fadD-1
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hol
Vreelandella olivaria
Pathway
hol00061
Fatty acid biosynthesis
hol00071
Fatty acid degradation
hol01100
Metabolic pathways
hol01212
Fatty acid metabolism
hol02024
Quorum sensing
hol04146
Peroxisome
Module
hol_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hol00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HORIV_43620 (fadD-1)
00071 Fatty acid degradation
HORIV_43620 (fadD-1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HORIV_43620 (fadD-1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HORIV_43620 (fadD-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hol01004
]
HORIV_43620 (fadD-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hol04147
]
HORIV_43620 (fadD-1)
Enzymes [BR:
hol01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HORIV_43620 (fadD-1)
Lipid biosynthesis proteins [BR:
hol01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HORIV_43620 (fadD-1)
Exosome [BR:
hol04147
]
Exosomal proteins
Exosomal proteins of breast milk
HORIV_43620 (fadD-1)
Exosomal proteins of breast cancer cells
HORIV_43620 (fadD-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
BBI51941
LinkDB
All DBs
Position
complement(2954788..2956152)
Genome browser
AA seq
454 aa
AA seq
DB search
MSEHANAAVLRGPALEGLDQYDSVTDVFHHAVARFKDKPAFSCMGKTLTFADLDRFSAQF
AAWLQHETDLVPGDRIAIQLPNVLQFPVAVFGALRAGLVVVNTNPLYTEREMAHQFKDSN
AKAIVILANMADKLEKVLDKTEIKHVIVTQLADLHDVPKRWLINAVVKHVKKMVPAYSLP
NAIGFRDALKGASLSHSEVKRSPDDLAALQYTGGTTGMPKGAMLTHRNLIANMLQAREAI
GPHLTDGEELVIAPLPVYHIYTFTVNCLFLMETGNHSLLITNPRDLDGFVKELKGLPFSA
FIGLNTLFNALCNRDDFKQLDFSKLKLTISGGMALTKAAAQRWETTTGCPIAEGYGLTET
SPIVSFNPTDAIQLGTIGKPVAGTAVKVVDGDGNDVALGEPGELCVQGPQVMKGYWQRED
ETRDAIDEDGWFHTGDIAVLQDDGYIRIVDRKKI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacacgccaacgccgccgttttacgtggcccagcgcttgaagggttggatcag
tacgattcagtcacggatgtttttcatcacgcagtagcacgttttaaggacaagcccgct
ttttcctgtatgggaaaaacgctcactttcgctgaccttgaccgcttctctgcgcagttt
gctgcttggctgcagcatgaaaccgacctcgtccccggagatcgtatcgccattcagttg
cccaatgtgctgcagtttccggtagcggtttttggcgcgctacgggcaggcttggtggtg
gttaacaccaacccgctatacaccgagcgggaaatggcccatcagttcaaggactccaac
gctaaagccattgtgattttggccaatatggcggacaagctggagaaagtgctcgataaa
acagagatcaaacacgttatcgtcacccagctagccgatttgcatgacgttcccaagcgc
tggctaatcaacgcagtggttaagcacgttaagaaaatggtgcctgcttattctttgcca
aatgcgattggttttcgcgatgcgctaaaaggcgcctcgctaagccatagcgaggtcaaa
agaagtccagatgatttagccgctcttcaatacaccggcggcaccacggggatgccaaag
ggggcaatgctgacccatcgcaacctcatcgccaatatgctgcaagcgcgtgaagcgatt
gggcctcatctgaccgatggcgaagagctggttatcgcaccgcttccggtttatcacatt
tacacctttacggttaactgtctgtttttgatggaaaccggcaaccactcgctgctgatc
accaaccctcgcgacctggatggttttgtcaaagagctcaaggggctgccctttagcgct
tttatcggcctcaatacgctgtttaatgcgctatgtaatcgcgacgatttcaagcagctc
gatttttccaaattgaagctgacgatttccggtggtatggcgctgaccaaagcagcggcg
cagcgctgggaaaccactaccggttgcccgatcgctgaggggtatgggctgaccgaaacg
tcgcccatcgttagttttaatcccaccgatgcgatccaactgggcactatcggtaagccc
gtggcgggcaccgcggtaaaagtcgtcgatggcgacggtaatgacgtggcactgggcgag
ccgggagaactctgcgtgcaagggccgcaggtgatgaaaggctactggcagcgcgaagac
gaaacccgcgacgccattgatgaggatggctggttccacaccggcgacatcgcggtgcta
caggatgatggctacattcgcatcgttgatcgcaaaaagatatga
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