Vreelandella olivaria: HORIV_43770
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Entry
HORIV_43770 CDS
T06227
Name
(GenBank) hypothetical protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hol
Vreelandella olivaria
Brite
KEGG Orthology (KO) [BR:
hol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hol03016
]
HORIV_43770
Enzymes [BR:
hol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HORIV_43770
Transfer RNA biogenesis [BR:
hol03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HORIV_43770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
BBI51956
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All DBs
Position
complement(2965135..2965995)
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AA seq
286 aa
AA seq
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MLLSSLTPSYQWLDTPDALDAACEQVADAAVIALDTEFFRENTFFPVPALIQFTAGEEAY
LIDPVAVPCTDKFRALLQNSAIKLLHACSEDLEVFQLWAGVLPEPLIDTQVVQGFLGENA
GMGYQKLVEFWVGETLPKEETRSNWLLRPLSPAQCHYAALDVIYLLKVWTLQAEKLAMLG
RREWVDTECASLIELAGRSVDNDQQWYTRQRQLWRLTPRQMEAYRLMTTWREGETRRRNL
PRNWLISDKLLFAIAEKMPSNRFELAEVEGIKPMLIKKRATHCWQW
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgtcctctcttaccccctcttatcaatggcttgataccccagatgcgcttgat
gcggcatgcgagcaagtagccgatgccgctgtgatcgctctggataccgagtttttccga
gagaacaccttttttccagtcccggcgctgatccaattcaccgcgggcgaagaggcttat
ctgattgatccggtggccgtcccttgcaccgataaattccgagcgctgctgcaaaatagt
gccatcaagctactgcacgcctgcagtgaagatctggaagtcttccagctctgggcgggc
gtactgccggagccgttaattgacactcaggtggtgcagggctttttgggcgaaaacgct
ggaatggggtatcaaaagctggtcgaattttgggtcggtgaaaccttgcctaaagaggag
acccgctcaaactggttactgcgcccactgtcacccgcccagtgccactacgctgcactg
gatgtgatctatctgttaaaagtctggacgctacaggcggaaaagctcgccatgctgggg
cggcgtgagtgggtggacactgaatgtgccagcttaatcgaactggctggccgtagtgtc
gataatgaccagcagtggtatacccgtcaacgccagctatggcgcttaacgccccgccaa
atggaagcgtatcggctgatgaccacctggcgtgaaggcgaaacacgccgccggaacttg
ccgcgcaattggttgattagcgataagctgttgtttgcgatcgccgaaaagatgcccagc
aaccgcttcgagcttgcggaggtggaaggcataaagccaatgctgatcaaaaagagggcg
acgcactgctggcaatggtga
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