Vreelandella olivaria: HORIV_47330
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Entry
HORIV_47330 CDS
T06227
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
hol
Vreelandella olivaria
Pathway
hol02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hol00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HORIV_47330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hol02000
]
HORIV_47330
Transporters [BR:
hol02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HORIV_47330
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
BBI52312
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All DBs
Position
3199844..3200476
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AA seq
210 aa
AA seq
DB search
MKDTNCFKYLLGSSVMVVGALGAGQTLADGEITFVSQGGAYQEAQTVAILDPVAEALGIT
IRQESAPDAWPMIKTQGTTGQAVWDVVDTPPLNCERGGNQGLIAELDFSQIPNAESMPEE
YKTPYSVAYEFYSSVLAYNPEAFAGNPPQSWEDFWNVEEYPGNRALRNHPLGTLEAALMA
DGVAREELYPLDVDRAFAKLEEIKPHITTW
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatactaactgcttcaaatacttgcttggttcctcggtaatggttgttggtgcg
cttggcgctgggcaaacgctggccgacggcgaaatcacgttcgtctctcagggtggcgcg
tatcaggaggcccaaacggtggccattctcgacccggttgctgaggcgctgggcatcacc
attcgtcaggagagcgcccccgacgcctggccgatgatcaagacgcaaggcaccaccggc
caggcggtatgggacgtggtcgatacaccaccattgaactgtgagcggggcggcaatcaa
gggctgattgcggaactcgacttcagccagattcctaacgccgagtcgatgcccgaggag
tataagacgccctactcggttgcctacgagttctactccagcgtactggcctacaatcca
gaggccttcgctggcaatccgccgcaaagctgggaggacttctggaatgtagaggagtat
cccggtaaccgtgcactgcgcaaccacccgctgggaacgcttgaagccgccttgatggct
gatggtgttgcacgagaagagctctatccgctagatgttgaccgggccttcgccaagctc
gaggagatcaaaccgcatatcaccacctggtga
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