Vreelandella olivaria: HORIV_49810
Help
Entry
HORIV_49810 CDS
T06227
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
hol
Vreelandella olivaria
Brite
KEGG Orthology (KO) [BR:
hol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hol03009
]
HORIV_49810 (dbpA)
Enzymes [BR:
hol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HORIV_49810 (dbpA)
Ribosome biogenesis [BR:
hol03009
]
Prokaryotic type
rRNA helicases
HORIV_49810 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
BBI52560
LinkDB
All DBs
Position
complement(3368740..3370173)
Genome browser
AA seq
477 aa
AA seq
DB search
MATSLWPKQGNTVSDSSFSSLALPNVLLSNLASLGYHEMSPVQAESLPPMLVGRDVLAQA
KTGSGKTAAFGLALLAKLKVETFAVQGLVLCPTRELADQVAEELRRLARGMANVKILTLC
GGAPFGPQLGSLEHGAHIVVGTPGRIDEHLRKGSLTLESLMTLVLDEADRMLDMGFQATI
DDIIAETPADRQTLLFSATFPDEQSSGGLTAMTRGIMREPVMVKIAEVHDATTIQQHFYS
VADEEARFDALRQLLLVYRPATSVVFCNTKRETQAVAEQLTDAGFSAVALNGDLEQKDRD
RILILFSNQSASILVATDVAARGLDIAQLDAVFNYQIARELDVHVHRVGRTGRAGASGIA
CTLVTPKESYRLERLEGLLEQAIKTEPLPKPQHSVPFEPLMATLQLAGGKKDKLRPGDIL
GALTSEGGLRGDQVGKIKVLARSAYVAVERDVIQQAQAKLERDKLKGRAFRVRRIRY
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcgctgtggcccaagcaaggtaataccgtgtctgactcctctttctcctcg
ttagcgttgccaaacgttctgctaagcaaccttgcgtcccttggctaccacgaaatgtcg
ccggtgcaggcggagagcctgccgcccatgctggttgggcgcgatgtattggcccaggcg
aaaaccggctcagggaaaacggcggcgtttggtttggccctgctggctaaattgaaagta
gagaccttcgcggtgcaaggcttggtgttgtgccccacaagggagctggccgatcaggtg
gcagaagagctgcgccggttagcgcgtggcatggccaacgtaaaaatactcaccctctgc
ggcggcgcgccctttggccctcagctcggttctttagagcatggcgcgcatattgtggtg
ggcacaccggggcgtatcgacgagcatttgcgcaaaggctcgctcaccctggagtccctc
atgacgctggtgctggatgaagcggatcggatgctggatatgggcttccaggcgaccatt
gatgacattattgctgagaccccagccgaccgccaaacgctgctgttcagcgcgactttc
ccggacgagcagtcatcgggcggcctaacggcgatgacccgcggcattatgcgtgaaccg
gtgatggtcaaaatcgccgaggtacacgacgccacgacgatccagcagcatttttatagt
gtcgctgatgaagaagcgcgattcgacgccctgcgccaactgttgctggtctatcggccc
gcgaccagcgtggtattctgtaacactaaacgcgaaacccaggcagtggctgagcaactg
accgatgcagggtttagtgccgtggcgttaaacggtgatttagagcagaaagaccgcgat
cgcatactcattctgttctctaaccagagtgcctctattctggtggccacggacgttgcc
gcccgtggcctggatattgcccaactggacgccgtgtttaactaccaaattgctcgcgag
cttgatgtgcatgtgcaccgggtaggccgcactgggcgtgccggggccagcggtattgcc
tgcacgttggtaactcctaaagagagttatcggctggagcggcttgaaggcttgctggag
caggcgattaaaaccgagcccctgccgaaaccccagcactcggtaccgttcgagccgcta
atggcgacgctgcagttagctggtggtaagaaagataagctgcgccccggtgatattctg
ggagcgctaaccagtgaaggtgggctgcgcggcgatcaagtgggtaaaatcaaagtactc
gcccgcagtgcctatgtggccgttgagcgagacgtgattcaacaagctcaggccaaactc
gagcgtgataaattaaaagggcgtgctttccgtgttcgccgtatccgttactga
DBGET
integrated database retrieval system
