KEGG   Vreelandella olivaria: HORIV_51170
Entry
HORIV_51170       CDS       T06227                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hol  Vreelandella olivaria
Pathway
hol03030  DNA replication
hol03430  Mismatch repair
hol03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HORIV_51170
   03430 Mismatch repair
    HORIV_51170
   03440 Homologous recombination
    HORIV_51170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hol03032]
    HORIV_51170
   03400 DNA repair and recombination proteins [BR:hol03400]
    HORIV_51170
Enzymes [BR:hol01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HORIV_51170
DNA replication proteins [BR:hol03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HORIV_51170
DNA repair and recombination proteins [BR:hol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HORIV_51170
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: BBI52696
UniProt: A0ABN5X7F5
LinkDB
Position
complement(3468989..3469714)
AA seq 241 aa
MFGIRPRQKITQADWTGYMAQRAQQAKNPALQQFFGTPLPDPETPISEVPMVALDMETTG
LDERRHAIVSIGLVPFTLNRIKLAERRYWVVNPSRPLAEASITYHHITHSEIAHAPDLEE
ILDALLAQLAGRLVVVHFRNIERPFLNAAVKTRRGEGVLFPMIDTMSLEARLHRQTLWAR
FRRWLGRPPVSIRLHASRERYGLPAYQGHHALVDALATAELLQAQIATHYRPDTPLKDMW
C
NT seq 726 nt   +upstreamnt  +downstreamnt
atgttcggtatacgcccccgtcagaaaatcacccaggccgactggacgggctatatggcc
cagcgggctcaacaggcgaaaaatcctgcgcttcagcaattttttggtacgccgttgcct
gaccctgaaacgcccatttccgaagtgcccatggtggcgctggatatggagaccacgggg
ctggatgagaggcgacatgcgattgtcagtatcggtcttgtaccctttacgttaaatcgt
atcaaattggctgagcggcgctactgggtagtgaacccttcaagaccgctggcagaagcc
tcaattacctaccaccatattactcactcagagatcgcccatgcgccggacttggaagag
atcctggacgcactgttggcccagttagcaggtcgcttggtggtggtgcattttcgcaat
attgagcggcccttcttgaacgcggcggtcaaaacccggcgtggggaaggggtgctgttt
ccgatgatcgataccatgtcactggaagcgcggctgcatcgccaaaccctatgggcgcgt
tttcgccgctggctgggtcgcccaccggtttccatccgtctgcacgcaagccgtgagcgc
tacggcttacctgcttaccaggggcaccatgccctggtcgatgcgctggccaccgcagag
ctgctgcaggcgcaaattgccacccactatcgccctgacacgcccttaaaagatatgtgg
tgttga

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