Homoserinibacter sp. YIM 151385: OF852_00580
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Entry
OF852_00580 CDS
T08733
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
hom
Homoserinibacter sp. YIM 151385
Pathway
hom00260
Glycine, serine and threonine metabolism
hom00630
Glyoxylate and dicarboxylate metabolism
hom00670
One carbon pool by folate
hom00785
Lipoic acid metabolism
hom01100
Metabolic pathways
hom01110
Biosynthesis of secondary metabolites
hom01200
Carbon metabolism
Module
hom_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
hom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
OF852_00580 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
OF852_00580 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
OF852_00580 (gcvP)
00670 One carbon pool by folate
OF852_00580 (gcvP)
Enzymes [BR:
hom01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
OF852_00580 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WBU38112
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Position
109747..112602
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AA seq
951 aa
AA seq
DB search
MTERFADRHIGTDSVEQLHMLQTVGYGTIDELMDAAVPSGIRVAAAAAEQSGIPAAVSER
EALAELRALAGRNRVRRSMIGLGYHGTITPAVIQRNVLENPSWYTAYTPYQPEISQGRLE
ALLNFQTMVSELTGLDTANSSMLDEGTAVVEAMLLARRASGAASRVFLVDADALPQTIAL
LEGRAEAVGIEIRVLDLAGAEAASLPEAFGIFVQYPGASGRIWDPSAVFAAVKAGGGVAI
GAADLLAMTLLTPPGELGADVAVGTSQRFGVPMGFGGPHAGFMAVRKGLERQLPGRLVGV
SQDADGHPAYRLSLQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPGGLTRIATEV
RRRAIQLGSMVIAAGGELGGEDFFDTLEVVAPGRAAALVAEAGERGYLLRLVDADRVGIT
VDETTTDADLVAVAGVFGWNEPDAPEPIRGAGLGTRSSTFLEHPVFNTHHSETGMMRYLK
WLADKDYALDRGMIPLGSCTMKLNAATEMAAVTWPEFAELHPFAPRDDVEGSLALVRQLE
DWLAEVTGYDTVSLQPNAGSQGELAGLLAIRGYHLANGDAQRTVCLIPASAHGTNAASAV
LAGMRVVVVATGVDGDVDLADLRAKIAANADALAALMVTYPSTHGVYEHEIREVADAVHA
AGGQVYVDGANLNALLGYARFGDFGGDVSHLNLHKTFCIPHGGGGPGVGPVAAKAHLAPF
LPGHPMAQSSEHAGGVSHDGAPVSAAPYGSPSILPISWSYVRMMGLEGLTQATGAAVLAA
NYVAARLREHFPVLYAGEGGLVAHECILDLRPLKEATGITVDDVAKRLIDHGFHAPTMSF
PVAGTLMVEPTESEDLPELDRFIDAMIAIKAEADAVAAGEWPAGDNPLVNAPHTAESAIA
GEWTHPYSRELAVYPAPGQVRAKYWPPVRRIDQAYGDRNLVCACPPIEAFA
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgacggagcgcttcgccgaccgccacatcggcaccgactcggtcgagcagctccacatg
ctgcagaccgtcggctacgggaccatcgacgagctcatggatgcggcggtgccctccggc
atccgggtcgcggccgccgcggccgagcagagcggcatcccggccgccgtctccgagcgg
gaggcgctcgcggagctgcgcgcgctcgcgggccgcaaccgcgtccgccgctcgatgatc
gggctcggctaccacggcacgatcacgccggccgtgatccagcggaacgtgctcgagaac
ccgagctggtacacggcctacacgccgtaccagccggagatctcgcagggccggctcgag
gcgctcctcaacttccagacgatggtctcggagctcaccggcctcgacaccgcgaactcc
tccatgctcgacgagggcacggcggtcgtcgaggcgatgctcctcgcgcggcgcgcctcg
ggcgcggcctcccgcgtcttcctcgtggatgcggatgcgctcccgcagacgatcgcgctc
ctcgaggggcgcgccgaggcggtcggcatcgagatccgggtcctcgacctcgcgggcgcg
gaggcggcatccctcccggaggccttcgggatcttcgtgcagtatccgggcgcctcgggc
cgcatctgggatccgagcgcggtcttcgcggcggtcaaggcgggcggcggcgtcgcgatc
ggcgcggccgacctgctcgcgatgacgctcctgaccccgccgggcgagctcggcgccgat
gtcgcggtcggcacgagccagcgattcggcgtgcccatgggattcggcggcccgcacgcg
ggcttcatggccgtccggaagggcctcgaacgacagctgcccgggcgcctcgtcggcgtc
tcgcaggatgccgacggccaccccgcctaccggctctcgctccagacgcgcgagcagcac
atccgccgcgagaaggccacctcgaacatctgcacggcgcaggtcctgctcgccgtcatg
gcgtccatgtacgccgtgtaccacgggccgggcgggctgacgcggatcgcgaccgaggtc
cgccgccgcgccatccagctcggctccatggtcatcgcggccggcggcgagctcggcggc
gaggacttcttcgacacgctcgaggtcgtggcaccgggacgcgccgcggcgctcgtcgcg
gaggccggcgagcgcggctacctcctccggctcgtcgacgccgaccgtgtcggcatcacg
gtcgacgagacgacgacggatgccgacctcgtcgccgtcgcgggcgtcttcggctggaac
gagccggacgcgccggagcccatccggggcgccggtctcggcacccgatcctcgaccttc
ctcgagcacccggtcttcaacacgcaccactccgagaccggcatgatgcggtacctgaag
tggctcgccgacaaggactacgcgctcgaccgcggcatgatcccgctcggctcctgcacc
atgaagctcaacgcggcgaccgagatggcggcggtgacctggcccgagttcgccgagctc
caccccttcgccccgcgggacgacgtcgagggctcgctcgcgctggtccgccagctcgag
gactggctcgccgaggtgacgggctacgacaccgtctcgctgcagccgaacgcgggcagc
cagggcgagctcgccggcctcctcgcgatccgcggctaccacctcgcgaacggggacgcg
cagcgcacggtgtgcctcatccccgcctccgcgcacggcacgaacgcggcgagcgcggtg
ctcgcggggatgcgggtcgtcgtggtcgcgacgggcgtcgacggggatgtcgacctggcc
gatctgcgtgcgaagatcgccgcgaacgcggacgcgctcgcggcgctcatggtcacctac
ccctcgacgcacggggtctacgagcacgagatccgcgaggtggcggacgccgtccacgcg
gcgggcgggcaggtctacgtcgacggcgcgaacctcaacgcgctgctcggctacgcgcgc
ttcggcgacttcggcggcgacgtctcgcacctcaacctgcacaagaccttctgcatcccg
cacggcggcggcggccccggcgtcggcccggtcgcggcgaaggcgcacctcgcgcccttc
ctgcccggccacccgatggcgcagtcctccgagcacgcgggcggcgtgtcgcacgacggc
gcgcccgtcagcgcggcgccatacggctcgccgtcgatcctgccgatctcgtggtcgtac
gtccggatgatgggcctcgaggggctcacgcaggcgacgggcgcggcggtgctcgcggcg
aactacgtggcggcgcgactgcgcgagcacttcccggtgctctacgcgggcgagggcggc
ctcgtcgcgcacgagtgcatcctcgacctccgccccctcaaggaggcgaccgggatcacg
gtcgacgacgtcgcgaagcggctcatcgaccacggcttccacgcgccgaccatgtcgttc
ccggtcgcgggcacgctcatggtcgagccgaccgagtcggaggacctgccggagctcgac
cgcttcatcgacgcgatgatcgcgatcaaggcggaggcggacgccgtcgcggcgggggag
tggccggccggcgacaacccgctcgtgaacgcgccgcacaccgccgagtcggcgatcgcg
ggggagtggacgcatccctactcccgcgagctggcggtgtacccggcgccgggtcaggtc
cgcgcgaagtactggccgccggtgcgccgcatcgaccaggcctacggcgaccgcaacctc
gtctgcgcctgcccgcccatcgaggccttcgcctag
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