Homoserinibacter sp. YIM 151385: OF852_02710
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Entry
OF852_02710 CDS
T08733
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hom
Homoserinibacter sp. YIM 151385
Brite
KEGG Orthology (KO) [BR:
hom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hom03016
]
OF852_02710
Enzymes [BR:
hom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
OF852_02710
Transfer RNA biogenesis [BR:
hom03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OF852_02710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
WBU38514
LinkDB
All DBs
Position
complement(568808..570034)
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AA seq
408 aa
AA seq
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MAEPTAAADAAHEHIDVIEDREGYLAALEVLRAGHGPIAIDAERASGFRYSQRAYLIQVY
RRGAEVFLFDPIAIGDMSELGELGREEEWVLHAASQDLACLREVGIHPVRLFDTELGARL
AGLPRVGLGTVVQELLGIHLAKEHSAADWSTRPLPQAWLVYAALDVELLVDVRDAVAGLL
EEQGKVEAAAQEFQAVLDRETPVRQDPWRRLSGIHGIRSQRILAVAKSLWETRDAYAREI
DTAPGRLVPDASLVNAAKANPASKRELAALREFTGRASRSQIDRWWGAIEAGRAMEDLPA
IRVPGDGPPPPRAWADKNPEADARLKAARPAVQAVAEELGLPVENLLTPDLLRRLAWTPP
EVHDRESIAAALAALGARPWQIDATAQAIAQSFVDGPQEPPEPVEPAS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
gtggctgagccgaccgccgccgccgacgcggcgcacgagcacatcgacgtgatcgaggac
cgcgagggctacctggccgcgctcgaggtgctgcgcgccggccacggcccgatcgcgatc
gacgcggagcgcgcctccggcttccgctactcccagcgcgcctacctcatccaggtgtac
cgccgcggggccgaggtcttcctgttcgacccgatcgcgatcggcgacatgtcggagctc
ggcgagctggggcgcgaggaggagtgggtgctccacgccgcgagtcaggacctcgcctgc
ctccgcgaggtcggcatccacccggtccggctcttcgacacggagctcggggcgcgcctc
gcgggcctgccgcgcgtcggcctcggcaccgtcgtgcaggagctcctcggcatccacctg
gcgaaggagcactcggcggccgactggtcgacgcgcccgctcccccaggcctggctggtc
tatgcggcgctcgacgtcgagctgctcgtcgacgtgcgggatgccgtcgcgggcctcctc
gaggagcagggcaaggtcgaggccgcggcgcaggagttccaggcggtgctggaccgcgag
acccccgtgcgccaggacccgtggcgtcgtctctccggcatccacggcatccgcagccag
cgcatcctcgccgtcgcgaagtcgctgtgggagacgcgcgacgcctacgcgcgcgagatc
gacacggcgcccggccggctcgtccccgacgcctcgctcgtcaacgccgcgaaggccaac
cccgcctccaagcgggagctcgcggcgctccgcgagttcaccggccgtgcgagccgctcg
cagatcgaccgctggtggggcgcgatcgaggccggccgcgcgatggaggacctgccggcg
atccgcgtgcccggcgacgggccgcccccgccgcgcgcctgggccgacaagaaccccgag
gcggatgcccgcctgaaggccgcgcgccccgccgtgcaggccgtcgccgaggagctcggc
ctgcccgtggagaacctcctcacaccggacctgctgcgccgtctggcctggacgccgccc
gaggtccacgaccgcgagtcgatcgccgcggccctcgccgcgctcggtgcgcgcccctgg
cagatcgacgcgaccgcacaagcgatcgcgcagtcctttgtggatggcccccaagagccg
ccggagcccgtcgagcccgcttcgtag
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