Homoserinibacter sp. YIM 151385: OF852_05025
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Entry
OF852_05025 CDS
T08733
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hom
Homoserinibacter sp. YIM 151385
Pathway
hom03030
DNA replication
hom03430
Mismatch repair
hom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OF852_05025 (holA)
03430 Mismatch repair
OF852_05025 (holA)
03440 Homologous recombination
OF852_05025 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hom03032
]
OF852_05025 (holA)
03400 DNA repair and recombination proteins [BR:
hom03400
]
OF852_05025 (holA)
Enzymes [BR:
hom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OF852_05025 (holA)
DNA replication proteins [BR:
hom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OF852_05025 (holA)
DNA repair and recombination proteins [BR:
hom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OF852_05025 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WBU38946
LinkDB
All DBs
Position
complement(1041280..1042326)
Genome browser
AA seq
348 aa
AA seq
DB search
MAAAPQRSGGAGRASGAKAKAAIPQLDWTAVRPAPVVLVSGPESLLAERSTRMLRDILRA
EDPSLEVSDIDAGGYAPGELATFASPSLFGEPRLIRVDHVEKCTDAFIEEALAYFAAPAE
DTVVVLRHASGVRGKKLLDALRGGLGGGIEIVCAELKRESDRADFVAAEFRMAQRRIAPG
ALRALVAAFQDDLSELAAACRQLLADTIDDVTEATVRQYYGGRVETTAFAVADAAIAGRH
GEALGLLRHAIASGSDPVPIVAAIASKMRTMGKISGARGSSGELAKRFGLAPWQVDRARR
DLQGWTDEGLGAVIRALADTDAQVKGAGRDPVFALERLIRTIAARGRA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcaccccagcggtccggaggagccggtcgcgcatccggggcgaaggcgaag
gccgccatcccgcagctcgactggaccgccgtccgtccggcgcccgtcgtcctcgtctcc
gggcccgagagcctcctcgcggagcgctcgacgcgcatgctccgcgacatcctccgcgcc
gaggatccgagcctcgaggtgagcgacatcgacgccggcggctacgcgcccggcgagctc
gcgaccttcgcgagcccctcgctgttcggcgagccgcggctcatccgggtcgaccacgtc
gagaagtgcaccgacgccttcatcgaggaggcactcgcctacttcgcggcacccgccgag
gacaccgtcgtcgtgctccggcacgcgagcggcgtgcgcggcaagaagctgctcgacgcg
ctccgcggcgggctcgggggcggcatcgagatcgtctgcgccgagctcaagcgggaatcc
gaccgcgccgacttcgtcgcggccgagttccgcatggcgcagcgccggatcgcgccgggt
gcgctccgcgccctcgtcgcggccttccaggacgacctctccgagctcgccgcggcgtgc
cggcagctcctcgccgacaccatcgacgacgtgaccgaggcgaccgtgcgccagtactac
ggcggccgcgtcgagacgaccgccttcgccgtcgcggatgccgcgatcgccggccgtcac
ggcgaggcgctcgggctgctccgccacgcgatcgcctccggctccgaccccgtgcccatc
gtcgccgcgatcgcgagcaagatgcgcaccatgggcaagatctcgggcgcccgcgggagc
tcgggcgagctcgcgaagcgcttcgggctcgccccctggcaggtcgaccgcgcgcgccgc
gacctccagggctggacggacgaggggctcggcgccgtcatccgcgcgctcgccgacacc
gacgcgcaggtcaagggcgcgggccgcgaccctgtcttcgcgctcgagcgcctcatccgc
accatcgccgcccgcggccgcgcctga
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