Homoserinibacter sp. YIM 151385: OF852_12385
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Entry
OF852_12385 CDS
T08733
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hom
Homoserinibacter sp. YIM 151385
Pathway
hom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OF852_12385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hom03021
]
OF852_12385
03400 DNA repair and recombination proteins [BR:
hom03400
]
OF852_12385
Enzymes [BR:
hom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OF852_12385
Transcription machinery [BR:
hom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OF852_12385
DNA repair and recombination proteins [BR:
hom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OF852_12385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AMIN-like
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WBU37701
LinkDB
All DBs
Position
2546123..2547115
Genome browser
AA seq
330 aa
AA seq
DB search
MLIAQRPTLSEESISEFRSRFVIEPLEPGFGYTLGNSMRRTLLSSIPGAAVTSIRIDGIQ
HEFDTVPGVKEDVVEIVLNIKNLVVSSEHDEPITAYLRKTGAGQVTAADISAPAGVEIHN
PELVIATLNDKAKFELELTIERGRGYVSATQNRSEFSEAGQIPIDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVETKPAISPRDAIASAGRTLVELFGLARELNTQAEGIEIGPAPVD
AVLSSELSMPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVKDK
LVELGLSLKDSVPGFDGAHFYGGYDDETNA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccaccctgtccgaggagagcatctccgagttccggtcgcgg
ttcgtcatcgagcccctcgagccgggcttcgggtacaccctcggcaactcgatgcgccgc
acgctgctctcctccatcccgggagccgccgtcaccagcatccggatcgacgggatccag
cacgagttcgacaccgtccccggtgtcaaggaggacgtcgtcgagatcgtcctcaacatc
aagaacctcgtggtctcgagcgagcacgacgagccgatcaccgcgtacctccgcaagacc
ggcgccggacaggtcacggccgccgacatctcggcgcccgcgggtgtcgagatccacaac
cccgagctcgtcatcgcgacgctcaacgacaaggcgaagttcgagctggagctcaccatc
gagcgcggccgcggctacgtgtcggcgacgcagaaccgctccgagttctccgaggccggc
cagatcccgatcgactcgatctactcgccggtgctcaaggtgacgtaccgcgtcgaggcg
acccgcgccggcgagcgcaccgacttcgaccgcctcgtggtcgacgtcgagacgaagccg
gcgatcagcccgcgcgacgcgatcgcgtccgccggccgcaccctcgtcgagctcttcggc
ctcgcccgcgagctcaacacgcaggccgagggcatcgagatcggccccgcgccggtcgac
gccgtgctctcgagcgagctgtcgatgcccatcgaggacctcgacctctcggtgcgcagc
tacaactgcctcaagcgcgagggcatcaacaccgtcagcgagctcgtcgccctctcggag
acgcagctcatgaacatccgcaacttcggtcagaagtccgtcgacgaggtcaaggacaag
ctcgtcgagctcggcctctcgctgaaggacagcgtccccggcttcgacggggcgcacttc
tacggcggctacgacgacgagaccaacgcctga
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