Homoserinibacter sp. YIM 151385: OF852_12605
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Entry
OF852_12605 CDS
T08733
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hom
Homoserinibacter sp. YIM 151385
Pathway
hom03420
Nucleotide excision repair
hom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OF852_12605
03430 Mismatch repair
OF852_12605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hom03400
]
OF852_12605
Enzymes [BR:
hom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OF852_12605
DNA repair and recombination proteins [BR:
hom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OF852_12605
MMR (mismatch excision repair)
Other MMR factors
OF852_12605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
AAA_11
AAA_22
DEAD
PAC4
ResIII
Motif
Other DBs
NCBI-ProteinID:
WBU37741
LinkDB
All DBs
Position
2590983..2593415
Genome browser
AA seq
810 aa
AA seq
DB search
MSMVLEGFDPDPEPGAGGASPGVDERLLEGLNPQQREAVVSRGKALLIVAGAGSGKTSVL
TRRIAGLLDNREAWPSQILAITFTNKAAAEMRERVHQLVGQAAEGMWISTFHSACVRILR
RQAEVFGMKSGFTIYDSADSRALIKRIVKELDADTLGFTVAGVAGRISKIKNELGDVEDF
ARNANYDDPKEAGFVEIFRRYTQGLRRANALDFDDLIGETVHLFRNFPEVAALYRRRFRH
VLVDEYQDTNHAQYALVRELVQPVEPQHVPADTRTRREPDGSIAGASLTVVGDSDQSIYA
FRGADIRNIVEFERDFPDTKVILLEQNYRSTQVILDAANAVISNNFDRKAKNLFTTSGRG
EQITGYTGYSGHDEAQFVADEVEALRQKGEGYDDMAVFVRTNAQTRPLEEIFIRSAIPYR
IPGGTKFYDRAEIKDAMAYLIQVANPDDDLALRRIMNTPRRGIGPATEAALQAHADRLGV
PLREALREVGEVGLGPKVTGAIRELSTVLDEAAALAAGSNTASPAPPSEILELLLRRTAF
IESLRASRDAQDEARAENLEELLAQTKEFRKQNPEGTLIDFLTNVALLAAADEIDDSDGS
VSIMTLHTAKGLEYDTVFLTGVEEGLLPHQMSAGEPGGVQEERRLFYVGVTRARKRLFLS
LAMTRAQFGETSVAMPSRYLQEIPMELVEWRQSPGMATSRGGTQPRALNARRGPGEGGAA
GGRFSLRDSLPAAASRPPREKREWTSAVTNAVRDNGDLALEPGDRIRHADFGEGRVTDVT
GVGPKRVAEVQFEQSGRKRLLIKIAPIEKL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggtcctcgaggggttcgaccccgacccagaacccggcgccggcggcgcgtcc
cccggcgtcgacgagcgcctgctcgaggggctcaacccccagcagcgggaggcggtggtc
tcgcgcggcaaggccctcctcatcgtcgcgggggccggctccggcaagacgagcgtcctc
acccgccgcatcgcggggctgctcgacaaccgcgaggcgtggccgagccagatcctcgcg
atcaccttcacgaacaaggccgccgccgagatgcgcgagcgcgtgcatcagctcgtgggg
caggccgccgaggggatgtggatctcgaccttccactcggcgtgcgtccgcatcctgcgc
cgtcaggccgaggtgttcggcatgaagtcgggcttcacgatctacgactccgccgacagc
cgcgccctcatcaagcggatcgtgaaggagctggatgcggacacgctcgggttcacggtc
gcgggggtcgcgggccgcatctcgaagatcaagaacgagctgggggatgtcgaggacttc
gcccggaacgcgaactacgacgaccccaaggaggcgggcttcgtcgagatcttccgtcgc
tacacgcaggggctgcgccgcgcgaacgcactcgacttcgacgatctcatcggcgagacc
gtgcacctgttccgcaacttcccggaggtcgcggcgctgtacaggcggcgcttccggcac
gtgctcgtcgacgagtaccaggacacgaaccacgcgcagtacgcgctcgtccgcgagctc
gtgcagccggtcgagccgcagcacgtccccgccgacacccgcacgcgccgcgagcccgac
ggctcgatcgcgggcgcgagcctcacggtcgtcggcgactcggatcagtcgatctacgcc
ttccgcggcgccgacatccgcaacatcgtggagttcgagcgcgacttcccggacacgaag
gtcatcctcctcgagcagaactaccgctcgacgcaggtgatcctcgatgccgcgaacgcc
gtcatctcgaacaacttcgaccgcaaggcgaagaacctgttcacgacgagcggccgcggc
gagcagatcaccggctacaccggctactcgggccacgacgaggcgcagttcgtggcggac
gaggtcgaggcgctccgccagaagggcgagggctacgacgacatggcggtgttcgtgcgc
acgaacgcgcagacccgcccgctggaggagatcttcatccgctcggcgatcccgtaccgg
atccccggcggcacgaagttctacgaccgcgccgagatcaaggacgccatggcgtacctc
atccaggtcgcgaacccggacgacgacctggcgctccgccgcatcatgaacaccccgcgc
cgcggcatcggcccggcgacggaggccgcgctgcaggcgcatgccgatcggctcggcgtg
ccgctccgcgaggccctccgcgaggtgggggaggtcggcctcggtcccaaggtcacgggc
gcgatccgcgagctgtcgaccgtgctcgacgaggcggcggcgctcgcggccggctcgaac
acggcatccccggcgccgccgtcggagatcctcgagctgctgctgcgccgcaccgccttc
atcgagtcgctccgggccagccgggacgcgcaggacgaggcgcgggcggagaacctcgag
gagctcctcgcgcagacgaaggagttccgcaagcagaaccccgagggcacgctcatcgac
ttcctcacgaacgtggcgctgctcgcggcggcggacgagatcgacgacagcgacggctcc
gtctcgatcatgaccctccacacggcgaagggcctcgagtacgacaccgtcttcctgacg
ggtgtcgaggaggggctcctgccccaccagatgtcggcgggcgagcccggcggcgtgcag
gaggagcgacggctgttctacgtgggcgtgacgcgggcccgcaagcgcctcttcctctcg
ctcgcgatgacgcgcgcccagttcggcgagacgagcgtcgcgatgccgagccgctacctg
caggagatcccgatggagctcgtggagtggcggcagtcgcccggcatggcgacctcgcgc
ggcgggacccagccgcgggcgctcaacgcgcgacgcgggcccggcgagggcggcgcggcg
ggcggccgcttcagcctccgcgactcgctcccggccgccgcatcccgcccgccgcgggag
aagcgcgagtggacgagcgcggtcacgaacgcggtgcgcgacaacggcgacctcgccctc
gagccgggcgaccgcatccggcacgccgacttcggcgagggccgggtgacggatgtcacg
ggcgtcggcccgaagcgggtcgcggaggtgcagttcgagcagtcggggcgcaagcgcctg
ctcatcaagatcgccccgatcgagaagctgtga
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