Homoserinibacter sp. YIM 151385: OF852_12680
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Entry
OF852_12680 CDS
T08733
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
hom
Homoserinibacter sp. YIM 151385
Pathway
hom00521
Streptomycin biosynthesis
hom00523
Polyketide sugar unit biosynthesis
hom00525
Acarbose and validamycin biosynthesis
hom00541
Biosynthesis of various nucleotide sugars
hom01100
Metabolic pathways
hom01110
Biosynthesis of secondary metabolites
hom01250
Biosynthesis of nucleotide sugars
Module
hom_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
hom00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OF852_12680 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OF852_12680 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
OF852_12680 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OF852_12680 (rfbB)
00525 Acarbose and validamycin biosynthesis
OF852_12680 (rfbB)
Enzymes [BR:
hom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
OF852_12680 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
WBU37756
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Position
complement(2612515..2613501)
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AA seq
328 aa
AA seq
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MRVLVTGGAGFIGSNLVRRALADELPGLEGSEVTVLDALTYSGNPANLASVEDSPRYRFV
HGDIRDRELLAGLLPGHDAILHLAAESHVDRSVRDAAPFVDTNVGGTQRLLDAAVEAGIP
RFVHVSTDEVYGSIDEGSWTEEQLLEPNSPYSASKAGSDLLARSYHRTHGLDVSITRCSN
NYGPYHFPEKLIPLFVTNLLDGRPVPLYGDGGNVRDWLHVDDHVRGIALVLQGGRAGEIY
NIGGGTELSNREITELLLEATGRDWSSVEPVEDRKGHDRRYSVDIAKIRRELGYAPRVGF
REGLAAVVDWYRERRDWWEPLKQRAGLD
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcctcgtgaccggcggtgccggattcatcggctcgaacctggttcggcgcgcc
ctcgccgacgagctgcccgggctcgagggctcggaggtgacggtgctcgacgccctcacc
tactcgggcaacccggccaacctcgcgagcgtcgaggactcgccgcgctaccgcttcgtg
cacggcgacatccgcgaccgagagctgctcgccggcctcctccccgggcacgacgcgatc
ctgcacctcgccgccgagtcccacgtcgaccgctccgtgcgggatgcggcgcccttcgtc
gacacgaacgtcggcggcacccagcggctcctcgacgccgccgtcgaggccggcatcccc
cggttcgtgcacgtctcgaccgacgaggtgtacggctcgatcgacgagggctcgtggacg
gaagagcagctgctcgagccgaactccccgtactcggcctcgaaggcgggcagcgacctc
ctcgcccgctcctaccaccgcacgcacgggctcgacgtgtcgatcacccgctgctcgaac
aactacgggccgtaccacttccccgagaagctcatcccgctgttcgtgacgaacctgctc
gacggccggccggtgccgctctacggcgacggcggcaacgtgcgcgactggctgcacgtc
gacgaccacgtgcgcggcatcgcgctcgtgctccagggcgggcgcgcgggcgagatctac
aacatcggcggcggcaccgagctctcgaaccgcgagatcaccgagctgctgctcgaggcg
accggccgcgactggtcctccgtggagcccgtcgaggaccgcaagggccacgaccgccgg
tacagcgtcgacatcgcgaagatccggcgcgaactcggctacgcgccgcgcgtcgggttc
cgcgaggggctggccgcggtcgtcgactggtatcgcgagcgccgcgactggtgggagccg
ctgaagcagcgcgccgggctcgactga
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