Halothermothrix orenii: Hore_00880
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Entry
Hore_00880 CDS
T00838
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hor
Halothermothrix orenii
Brite
KEGG Orthology (KO) [BR:
hor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hor03400
]
Hore_00880
DNA repair and recombination proteins [BR:
hor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Hore_00880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
DnaB_C
Zn_ribbon_LapB
ChlI
Lon_C
AAA
AAA_16
AAA_24
AAA_22
AAA_14
ABC_tran
GvpD_P-loop
nSTAND3
KTI12
TniB
Rad51
CbiA
AAA_5
RNA_helicase
NTPase_1
ATPase_2
SRP54
Isochorismatase
AAA_28
NPHP3_N
MeaB
AAA_19
NACHT
NB-ARC
AAA_33
DZR
DUF7125
Motif
Other DBs
NCBI-ProteinID:
ACL68849
UniProt:
B8D095
LinkDB
All DBs
Position
106731..108086
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AA seq
451 aa
AA seq
DB search
MPRPKTYYICSECGYKSAKWMGRCLNCGAWNTFQELDEEAIEEKVDIKVTPSSITDIKAG
ACPRLSSGIGEFDRVLGGGVVPGSLILLGGAPGIGKSTLVLQMARHFSEKYGKVLYVSGE
ESASQLKMRAGRLGAINEDLYVLSETNFQQIYGVIQNEKYELIIIDSIQTIFDPRIESTP
GSISQVKEVTNRLLIQAKKLEVPIVLIGHVTKEGHLAGPRVLEHLVDTVLQFEGDRNYIY
RILRAVKNRFGSTNEIGVFEMMGSGMREVVNPSEIFLKGRAQGVSGSVIVPVVEGSRPLL
VEVQALVTYSSFGTPQRLTTGVDRKRVSILLAVLEKKAGINFHNQDVNINITGGLKVEEP
ALDLGIITAILSSCKDQEVAPDLAVIGEVGLAGEIRAVSQIERRLSELKKMGFKEVVIPG
GNISGLDFDPDINIVEVKNVNDLMKILFNRR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcccagacctaaaacctattatatctgcagtgaatgtggttataaatctgctaaatgg
atgggacgttgtctaaactgtggtgcctggaatacttttcaggaactggatgaagaagcc
attgaggaaaaggtggatatcaaggttacccctagttcaataactgatataaaagccggg
gcctgtccccggctttcttccggtattggggagtttgacagggtgcttggtggaggtgtt
gtgcccggttctttaattctacttggaggtgcccctggaataggtaaatcgaccctggtt
cttcaaatggccaggcacttcagcgaaaaatatggaaaagttttatatgtcagtggtgaa
gaatcagcttcccagttaaaaatgagggccgggaggctcggggctataaatgaggattta
tatgttctttctgaaactaattttcaacaaatttatggtgttatacaaaatgaaaaatat
gaattaataataatagattctatacaaacaatatttgacccccggattgaatctaccccc
ggtagtataagccaggttaaggaagttactaataggttacttattcaggccaagaaactg
gaagttcccatcgttttaataggacatgttaccaaggaaggacatctggccggtccccgg
gtcctggaacatttggttgatacagttcttcagtttgaaggggacaggaattacatctat
cgaattctcagggcagtaaaaaatcgttttggctctacaaatgagataggtgtctttgaa
atgatgggaagtggtatgagagaagtggttaatccctcggaaattttccttaaagggagg
gcccagggggtatcgggttctgtgatagttccggttgtcgaggggagtagaccccttctt
gttgaggttcaggccctggtaacctactcgagttttgggaccccccagcggttaacaacc
ggtgttgaccggaagagggtttctattttactggctgtcctggagaaaaaggctggtatt
aattttcataatcaggatgttaatattaatataacagggggcttaaaagtagaagagccg
gccctggatctcggtataataacagctattttatcaagttgtaaagaccaggaggtagct
ccggacctggctgtgattggagaagtaggactggccggggagatacgggctgtcagtcag
atagagaggcgtttaagtgaattaaaaaagatgggctttaaggaagttgttattcctgga
ggcaatatatctggtctggactttgacccggatattaatatagttgaagttaaaaatgtt
aatgatctcatgaagatattgtttaacaggaggtga
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