Halothermothrix orenii: Hore_01450
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Entry
Hore_01450 CDS
T00838
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hor
Halothermothrix orenii
Pathway
hor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hore_01450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hor03021
]
Hore_01450
03400 DNA repair and recombination proteins [BR:
hor03400
]
Hore_01450
Enzymes [BR:
hor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hore_01450
Transcription machinery [BR:
hor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Hore_01450
DNA repair and recombination proteins [BR:
hor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Hore_01450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF4559
CTD12
AMIN-like
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ACL68906
UniProt:
B8D0T7
LinkDB
All DBs
Position
150187..151131
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIEKVECTDNYGKFEVAPLERGYGITLGNSLRRVLLSSLPGAAITSVKIEGVR
HEFSTIPGVVEDVSEVILNLKGVVLKYKGEDIEKITLNCEGEGEVTAGDFKTSGDIEVIN
PDHHIATLAEGGKLQLEATVEFGRGYVTAEENKEHFDRVIGLIPIDSSFSPIERANFKVE
NTRVGQVTDYDRLVLEVYTNGSISPEDAISLAAKIMVEHLELFLNLTDEVTDVEIMVEKE
EEEKDKILDTTIEELDLSVRSSNCLKRAGINTVGELINKTEDDLMKVRNLGKKSLQEIKE
KLNELDLKLKEPEI
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatagagattgagaaaccgaaaatcgaaaaggttgagtgtactgataattatggaaaa
tttgaggttgctcccctggaaagagggtatgggataaccctgggaaattcactacggaga
gttcttttatcctctttgccgggagcagccataacttctgttaagattgaaggtgtcagg
cacgaatttagcaccattcccggtgttgttgaagatgtttccgaggttatactgaattta
aaaggggttgtcttaaaatataaaggtgaagatattgaaaagataactcttaactgtgaa
ggagaaggggaagtaactgccggggatttcaaaacttctggtgacatagaggttataaat
ccagaccatcatattgctactctggccgagggtggaaagttgcagttggaagctactgtt
gagttcggtagaggttatgtgactgctgaagagaataaggaacattttgaccgtgttatt
ggtttaattccgattgactcctcttttagccccatagaaagggctaattttaaggttgag
aataccagggtaggccaggttactgactatgacaggcttgtccttgaggtctatacaaat
gggagtatatcccctgaagacgctataagtttagcggccaagattatggttgaacatctg
gaattattcttgaacctgaccgacgaagtaaccgatgttgagattatggtagaaaaagaa
gaagaagaaaaagataaaattctcgatacaactattgaagaactggatctctctgtccgt
tcttcaaactgtttaaaacgtgctggaattaatacagttggtgaattaattaataagact
gaagatgatttaatgaaggtacgtaacctcggtaaaaaatcgttacaggagataaaagag
aaattaaacgaactggatttgaaacttaaagaacctgaaatttaa
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