Halothermothrix orenii: Hore_04020
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Entry
Hore_04020 CDS
T00838
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hor
Halothermothrix orenii
Brite
KEGG Orthology (KO) [BR:
hor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hor03400
]
Hore_04020
DNA repair and recombination proteins [BR:
hor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Hore_04020
Archaeal homologous recombinant proteins
Hore_04020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ACL69161
UniProt:
B8D1T4
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All DBs
Position
412184..413491
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AA seq
435 aa
AA seq
DB search
MDCIQNQYKFIVHELITVVIKRGRGPLRILHTADWHLGKHLEGWSRYEEQKEFVEEIIEI
ADDNKVDMVLICGDIFDTTNPPAEAEQLFFQAMDYLSKGGERVICLISGNHDSPNRLMAP
GPLASRQGIFIMDEPRGDRYKLDDDRVLNRGQGYIELEINGEGVVLTALPYPSESRLNQV
FSWTGDDRAVQESYSRRVGQIFSHLEQYYRENTINIAMSHLFVAGGQTTRSERPIQVGGS
LTVLPEHLPEKSQYTALGHLHRYQIASSARRAYYSGSPLQYSLSEKDHKKCVNLVELHPG
EEARIEQVELTTKKPIEVWEAEGVEEAIKMVEANKDRSVWAYLYINVDKTLLQSEIKKIK
EIKKDILCINPITPEEKYEWETIKMPDEDLDIMELFKEYYRKTKKVEPDDDIIRMFSSIV
NDTREKGEHDETAAS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggactgtatacaaaatcaatataagtttattgtacatgaacttataactgttgttata
aaaagggggagaggtcctttgagaattttacatactgctgactggcatctggggaaacac
ctggagggatggagtagatatgaagaacaaaaagaatttgttgaagaaataattgaaata
gctgatgataataaggtagacatggttttaatatgtggggatatatttgacactactaac
cctccagcggaggcggaacagcttttttttcaggcgatggattacctgtcaaaaggtggg
gagagggtaatctgtttgatctctggtaaccatgatagtcccaaccgtcttatggccccg
gggcctctggcttccagacagggaatttttattatggatgagccccggggagacaggtat
aagctggatgatgaccgggtgttaaaccgtggtcaggggtacatagaacttgaaattaac
ggagaaggtgttgtccttacggctctgccctatccttctgagagccggttaaaccaggtc
ttttcatggaccggtgatgaccgggcagtgcaggaaagttattcccgtcgagtgggtcag
attttttcccatttagagcaatattatcgtgaaaatacaatcaacattgccatgagtcac
cttttcgttgccgggggtcagactacccggtctgaaagacccatccaggttggtggcagc
ctgacagtattaccggaacaccttccagaaaaatcccagtacacagccctgggccacctc
catcgttatcaaattgcttcttcagcccggagggcttactattcaggttctccgttgcag
tatagcctcagtgaaaaagatcataaaaagtgtgttaaccttgtagagcttcatccggga
gaggaggcccggattgaacaggttgaattgacaacaaaaaaaccaatcgaggtctgggaa
gcagaaggggttgaagaggctataaaaatggttgaggccaataaggaccgttctgtctgg
gcatacctttatataaatgtggataaaactctacttcagtctgaaattaaaaaaataaag
gaaattaaaaaggatattctatgtattaaccccataacccctgaagagaaatatgaatgg
gaaactataaagatgcctgatgaggacctggatataatggaattgtttaaagaatattat
cgtaagacaaaaaaagttgagcctgatgacgatattatcaggatgtttagcagtattgtt
aatgataccagggaaaagggggagcatgatgagaccgctgcttcttaa
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