Halothermothrix orenii: Hore_04030
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Entry
Hore_04030 CDS
T00838
Name
(GenBank) Exodeoxyribonuclease I subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hor
Halothermothrix orenii
Brite
KEGG Orthology (KO) [BR:
hor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hor03400
]
Hore_04030
DNA repair and recombination proteins [BR:
hor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Hore_04030
Archaeal homologous recombinant proteins
Hore_04030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
HMMR_N
ABC_tran
Lebercilin
Myb_DNA-bind_3
DUF5344
Vac_Fusion
Motif
Other DBs
NCBI-ProteinID:
ACL69162
UniProt:
B8D1T5
LinkDB
All DBs
Position
413472..416798
Genome browser
AA seq
1108 aa
AA seq
DB search
MRPLLLKISGLNSFVQEEIINFKKLTEKGLFGIFGPTGSGKSSILDAITIALYGKIARDT
KEFINKETGELYVYFEFAMGSNQKTYCIDRKLKTSDNNGYTTSRVRLAIKENGKVEEVYE
KVREVEDKVEKIIGLNHEDFMRTVVLPQGQFSEFLTLQGKKRRDMLERILNLEEFGERLM
EKLRLRKNIKESQLKSVETILTSYEDVSEKSLEDILNKLENLKKEIGYKKKRLQEKRNEY
EKYKEVWTRQKQLLKYQEKLDTLEERSERISNLKNKMEQAKKALNLKKDINRLERYHQER
KETNQKVENLEKMIVDLREKRDRYNREYEESLRAKEKELPDLTKKKLEIKDAIKLYEQNK
GIKKEVTGKAEKLKQMVQDKNSLEEYLKRGQEKSRVIKQQIKDLEDIIEKQVINSDYRKT
IMAGLNLERDYKQVQKDIKVINQGIKRLEREIWSLDEKRKDKSGELKRIESGILYQYEKI
IGDKEKAERELNGQKEKLEDDINKKRKQLEDLEKEIEDYKIRNLAGILAGKLTEGSPCPV
CGSTEHPRVAEKIDKAGLQKLLNTRKEIDSKLTELEERLNKYNSGMSILNKELTRLRQEK
EEVILSFDNVLSELEEYDGVLTTGPGELRRKRDRVKNELTKYTTQLETKQKDLADRKDKM
KELKSLNSTLKQEYFKLIGELGIDDIADELENINKKDKERENYQKRLTQLRQQYEKINNR
IENYRVSFNETEREITIFEHKIQTLKDKYQENRKEIENKVGDRDPLHYLKEVESREEELK
KRVDKYKKALEDTTDLLNNKERLMERLKQNRATLIKEISDTEQYLKEKMDEYKFESFDDV
RKYLSWENQIRAWEEEITEFEDLKKEVESNITRLKMELNGQSISQERWTKIKADRESLEE
NLSRLQEELGSCKQTIEELKRKLELKRKNQEKKEELEHDLAVIKDINDLIRGKSFVEFVA
MKQLRYIALEASSRLMEITNNRYKLELDNQGEFVICDNYNGGVRRDCKTLSGGETFLTSL
SLALSLSSHIQLKGNSNMEFFFLDEGFGTLDVNLLDIVMNSLERLHNEHLTVGIISHVEE
LKNRVPVKLMVEPAEPGLHGSRVRIEYT
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgctgcttcttaaaatttcgggtttaaatagctttgtccaggaagagattatt
aattttaaaaagctgaccgaaaaagggttatttggtatttttggtcccaccgggagtggt
aagtcgagtattttagatgccataaccattgccctttatgggaaaatagcaagggatacc
aaagaatttattaataaagagaccggcgagctttatgtctatttcgaatttgccatggga
agtaatcaaaagacttattgtattgacagaaaactgaagacctctgataacaatggatat
actacctcacgggttcgccttgccattaaagaaaatggcaaggttgaggaagtctatgaa
aaagtgagggaagtcgaggataaggttgaaaaaattattggccttaatcatgaggatttt
atgcgaaccgtggttttaccccagggacagtttagtgagtttttaacccttcaaggaaag
aaacggcgggacatgctggaaaggattcttaacctggaagagtttggtgaaagattgatg
gagaaattgcggttacggaaaaatataaaagagagtcaactaaaaagtgtggaaactatc
ctgaccagttatgaggatgtatcagaaaagagtcttgaagatatcctcaataaacttgaa
aatcttaagaaagaaattggttataaaaaaaagaggttacaggaaaagagaaatgagtat
gagaaatataaagaagtctggaccaggcagaaacagcttttaaaataccaggaaaaactt
gatactctagaggaacgttctgagagaatctctaaccttaaaaacaaaatggaacaggct
aaaaaggccctgaacctgaaaaaagatataaacaggctggaaagatatcatcaggagcga
aaagaaactaaccagaaggtagagaatctggagaaaatgattgtagatttaagggaaaag
agggatagatataaccgtgagtacgaagagagcctcagggcaaaagaaaaagaattacct
gacctaacaaaaaagaaactggaaatcaaggatgctattaaactctatgagcaaaataaa
gggataaaaaaagaggtaaccgggaaagcagaaaaattaaaacaaatggtgcaggataaa
aatagtcttgaagaatatttaaaaaggggtcaggaaaaatcccgggtgatcaaacagcaa
atcaaagacctggaagacatcattgaaaaacaggtcattaattcagattaccggaaaaca
ataatggcagggcttaaccttgaaagagactataagcaggttcaaaaagacattaaggtg
attaatcaggggataaagaggcttgaaagggaaatatggagccttgatgaaaagaggaag
gataaatctggagaattaaaaagaattgaaagtggaatcctttatcaatatgaaaaaata
attggtgataaagaaaaagcggagagggagttaaacgggcagaaggaaaaacttgaagat
gacattaataaaaaaagaaaacaactggaagatttagaaaaggaaattgaagattataaa
attagaaatctggcaggtattctggccgggaaattaactgagggttctccatgcccggtc
tgtggctcgactgaacacccccgggtagctgagaaaattgataaagcggggcttcaaaag
ctcctgaataccagaaaagagatcgatagcaaattaacggaattagaggagaggttaaat
aaatataattccgggatgagtattttaaataaagaacttaccagattacggcaggaaaaa
gaagaagtgattttatcatttgacaatgttctgtcagaacttgaagaatatgatggagtt
ttaacaacaggtccgggggagttgagaagaaagagggacagggtaaaaaatgagttgaca
aaatatactacccagttggaaacaaagcaaaaagatcttgctgacaggaaagataaaatg
aaagaattaaagagtcttaatagtaccttgaaacaggagtattttaaattaatcggggaa
cttggcattgatgatattgctgatgaacttgaaaatataaataaaaaggataaagagagg
gaaaattaccagaagaggcttacccaattacgtcagcagtatgaaaagattaataaccgg
attgaaaattaccgggttagctttaatgaaactgagagggaaattacgatttttgaacat
aagatacaaacactaaaggataaatatcaggaaaatagaaaagagattgaaaataaggtt
ggtgacagggatccccttcattatttaaaagaggttgaaagccgggaagaagagttgaaa
aaaagggtagataaatataaaaaggcccttgaagatactacagaccttttaaataacaaa
gaacgtcttatggagaggttaaaacaaaaccgggctaccctgataaaagaaatcagtgat
acagagcaatatttaaaagagaaaatggatgagtataaatttgagagttttgatgatgta
cgcaaatacctgtcctgggaaaaccagatcagggcctgggaggaagaaataactgagttt
gaagatttaaaaaaagaggtagaaagtaatattaccagattaaaaatggagcttaacgga
cagtccatcagtcaggagcggtggactaaaataaaggctgacagggaaagccttgaagag
aatctcagcaggctacaggaagaacttggttcctgtaagcagactattgaggaattgaaa
agaaagctggagcttaagcgcaaaaatcaggagaaaaaagaggaactggagcatgacctg
gcagttattaaggatattaatgaccttatcaggggcaaaagttttgttgaatttgtggcc
atgaaacagctgaggtatatagccctggaggcttccagcaggttgatggaaataactaat
aacaggtacaaactggagctggataatcagggtgaattcgttatctgtgataattacaat
ggaggtgtcaggagagactgtaaaaccctgtccggaggagaaactttcctgacatccctg
tcactggccctgtccctgtcctcccatattcagctcaagggtaattcaaatatggaattt
ttcttccttgatgaggggtttggaacactggatgtcaacctgttggatattgttatgaat
tcactggagcggttgcataatgaacacctgacggtcggtattatcagtcatgttgaagaa
cttaaaaacagggtcccggttaagcttatggtcgaaccggctgaaccgggacttcatggt
agccgggtcaggattgaatatacataa
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