Halothermothrix orenii: Hore_06430
Help
Entry
Hore_06430 CDS
T00838
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hor
Halothermothrix orenii
Brite
KEGG Orthology (KO) [BR:
hor00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hor01002
]
Hore_06430
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hor01011
]
Hore_06430
Peptidases and inhibitors [BR:
hor01002
]
Cysteine peptidases
Family C82
Hore_06430
Peptidoglycan biosynthesis and degradation proteins [BR:
hor01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Hore_06430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Erf4
Motif
Other DBs
NCBI-ProteinID:
ACL69400
UniProt:
B8D2H3
LinkDB
All DBs
Position
696953..698596
Genome browser
AA seq
547 aa
AA seq
DB search
MKKIVIIFVFSLLLVILNNSLVIRAYTTPSPELQTIQLKSRSIEYESSGKLLSELIKLFY
EERNYNPAWCSQTEIYPQAYILLKIIKEADREGLDPSAYYYSLISNYVRELENKIIRNSS
ITREVALSFELLMTKVYLDYTLDLLTGYTRNGMFNKMYDKHELIKKLNRAIEQESLGKFF
IDLYPGQELYFRMRKALSHLRNISSKDWPRVGYGPPLQRGDYSKRIIELRRRLYLSGDLS
EEQLNTGTYFDRELEKAVRKFQRRHGLKDSGIVDDKTIEALNIPVKEKINKIIINMERLR
WLPRDNPDLCVMVNIPEYKLKVIREDKVILESKVIVGSRENQTPSFNDSIEYIVLNPYWY
IPDNITRYELLPQIKKDPDYLDKHNIQILSGFEGEVKIIPEDQINWDEVTPENFSYKLRQ
KPGPGNSLGSIKFLFPNDFNVYLHDTPSRGLFEYRERALSHGCIRVERPLELAKVLISQS
NWSYNEVISIINSGNREVIELKNPVPIYLIYLTVWVDDDGVIHYREDIYQRDKKLVHEMM
KKAVNDS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatagttattatttttgtatttagtttattgttagtaatattaaataatagt
ctggttatcagggcatatactacaccatcaccagaattacaaactatccagctgaaaagt
cgctctattgagtatgaaagtagtggaaagttattatcggaattgataaaactgttttat
gaagaacgaaactataatcctgcctggtgtagtcagacagagatctatccccaggcctac
atattattaaaaataataaaagaggctgaccgggaaggccttgacccctcggcctattat
tattccctgatttcaaattatgtcagggaactggaaaataagattataagaaatagtagt
attaccagggaagttgcgctcagctttgaattgttaatgacaaaagtttatctagattat
acccttgatttattgacaggttataccagaaacggaatgtttaataaaatgtatgataaa
cacgagcttattaagaagttaaacagagcgatagaacaagaaagcctggggaaatttttt
attgatttatatcccggtcaggagctgtatttcagaatgagaaaggccttatcccacctg
agaaatatatcatctaaagactggcccagagtaggttatggccccccattacagcgcggt
gactatagtaagagaatcattgaactcaggagacggctttatttgtctggagacctgtct
gaggaacaattaaatacaggtacctattttgacagggaactggaaaaagcagtcaggaaa
tttcaaaggaggcatgggttaaaagatagtggaatcgttgatgataaaacaattgaggcc
ctgaatattcccgtaaaagaaaagataaataaaattataataaatatggagagactaaga
tggcttcccagggataatcctgacctgtgtgtaatggtaaatattccagaatataagcta
aaggttattagggaagataaggttatccttgaatctaaagttattgtaggaagtagagaa
aatcagactccatcctttaatgacagtattgagtatattgttttaaatccttactggtat
ataccagataatattaccagatatgaattgttacctcaaataaaaaaagacccggattat
ctggacaaacataatattcagattttaagtggttttgaaggagaagtaaaaattatacca
gaagaccagataaactgggatgaggtaacacctgaaaactttagttataaattacgtcag
aaaccaggcccgggtaattccctgggtagtattaaatttttgtttcccaatgatttcaat
gtatatttacatgacactccatccaggggattatttgaatacagggaacgggctttaagt
catggatgtatcagggtggaaagacctctggagctggcgaaagttcttataagccagagc
aactggagttataatgaagtaattagtataataaatagtggtaacagggaggttattgaa
ctaaaaaaccctgttccaatctatttaatatatttgactgtctgggttgatgatgatggt
gtaatacattaccgggaagatatttaccagcgtgataaaaaacttgttcatgaaatgatg
aaaaaggctgttaacgattcatag
DBGET
integrated database retrieval system
