Halothermothrix orenii: Hore_06720
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Entry
Hore_06720 CDS
T00838
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
hor
Halothermothrix orenii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
PAS_9
Sigma54_activ_2
PAS_4
HTH_8
PAS_8
AAA_2
AAA_5
PAS_10
AAA
HTH_50
Diguanyl_cycl_sensor
Mg_chelatase
sCache_3_3
AAA_16
AAA_7
Bac_DnaA
AAA_30
AAA_3
HTH_30
HTH_28
AAA_19
DUF815
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ACL69429
UniProt:
B8CVW0
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Position
728887..730632
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AA seq
581 aa
AA seq
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MSEKVNFKQLSELNRKTDVILNSTHDGLISIGKDYKVELFNRAAEKILGIKKDRVLGKDV
REVIPNTRLHIVLNKGEAELNKIQHAGDITIITNRVPVYDEQGNIIGAVAVFRDITEVKK
LAEEITNLKEMRTLLEAIINATQDAISVVDEKGIGILINPAYTRLTGLTEEDVIGKPATV
DIAEGESMHYRVLKTKKPVKGVKMKVGPSKKEVIVDVAPIIVDGKLKGSVGVIHDVSKIK
RLTEELDHVRRIIRHLNAKYTFEDIIGESETMKAAKNQARKASKTPVTVLLRGESGTGKE
LFAHAIHNASPRQNNKFIRVNCSAIADNILESELFGYEEGAFTGARKGGKKGYFEEADGG
TVFLDEIGKISLDLQAKLLRVLQEREIVRVGGTRPRNVDVRVIVATNTNLERAIQEGNFR
EDLYYRLNVFPLHIPPLRERKEDIPLLVHHMIRKFNQEYGRSVKGCSEDALQKLREYHWP
GNVRELENLIGRAMINMGIEEEVIRLKHLPFFDGPGNKKTRENKDELNVEDRSLKEIVES
TEKKAIIEALNKTDGNRTEAAKLLGIAIRSLYYKLDKYGID
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaggttaattttaaacaattaagtgaattaaaccggaagacagatgttata
ttaaattcaactcatgatggccttatatctattggaaaagattataaagttgagctcttt
aatagagcagctgaaaaaatactgggtattaaaaaagatagagttcttggcaaagatgta
agagaagtaattcctaacacaaggcttcatattgttcttaataagggtgaggcggaacta
aataaaattcaacatgccggtgatattactattattactaaccgggttcctgtatatgat
gaacagggaaatataattggggcggtagctgttttcagggatattactgaagtcaaaaaa
ctggcagaagaaattaccaatttgaaagagatgaggaccctactggaagctataataaat
gctactcaggatgctatttcagtagttgatgaaaaaggaataggaatattgattaatcca
gcctatacccgtttgaccggtttgacagaggaagatgttattggtaaaccggctactgtg
gatatagctgaaggggagagtatgcactaccgtgttttaaagaccaaaaaaccggtaaaa
ggggtaaagatgaaagttggtccatcaaagaaagaagtcattgtcgatgtggcccccatc
atagttgatgggaaattaaagggaagtgttggagttatccatgatgtttctaaaattaaa
cgtttaactgaagaactggatcatgtcaggagaattatcaggcatttaaatgctaaatac
acctttgaagatatcattggagaaagtgaaaccatgaaggctgccaaaaaccaggccagg
aaagcctcaaaaacaccggttactgtcttattaaggggggaaagtggtactggaaaggaa
ctttttgctcatgctattcataatgccagtccccgccagaataataaatttatccgggtt
aactgttcagcgattgctgataatatcctggaaagtgaattatttggttatgaagagggg
gcctttaccggtgccagaaagggtggtaaaaaggggtattttgaggaagcagacggaggc
actgttttcctggatgagattggaaaaatcagtctggacctccaggctaaactattacgg
gtcttacaggaacgggaaattgtaagggttggtgggaccaggcccagaaatgttgatgtt
cgtgttatagtagcgacaaataccaatctggagcgggccattcaggaaggaaacttcaga
gaagatttatattatcgtcttaatgttttccctcttcatattccacccctaagggaaaga
aaagaggatataccgttgctggttcaccatatgattagaaaatttaatcaggaatatggt
cgttcggttaagggttgtagtgaagatgcccttcagaaattaagggaataccactggccc
ggtaatgtgagagagctggaaaatttaataggtcgggccatgataaatatgggaatagaa
gaagaggttatcaggttaaagcatctcccattttttgacggaccggggaataaaaaaacc
cgtgaaaataaagatgaattgaatgttgaagatcgttcattgaaagaaatagtggaatca
accgagaaaaaagctattatagaagccttgaataaaactgatgggaacaggacagaggct
gctaaattactcgggatagcaattagaagcctttattataagcttgataaatacgggatt
gactga
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